RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 KRT31Q15323 416 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 TCP11X2Q5H9J9 407 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 KCNV1Q6PIU1 500 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 APTXQ7Z2E3 356 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 FILIP1Q7Z7B0 1213 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 DAW1Q8N136 415 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 NMT1P30419 496 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 CRHR2Q13324 411 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 CCDC62Q6P9F0 684 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 NPLOC4Q8TAT6 608 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 MAML3Q96JK9 1138 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
CTNNA1-236ENST00000522792 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 ZNF131P52739 623 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 TTLL4Q14679 1199 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 ODR4Q5SWX8 454 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 TSG101Q99816 390 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 GPRC5CQ9NQ84 441 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.33
CTNNA1-236ENST00000522792 SLC15A5A6NIM6 579 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 ATP4AP20648 1035 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 SPAG1Q07617 926 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 HSDL1Q3SXM5 330 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 EPM2AIP1Q7L775 607 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 NOC3LQ8WTT2 800 aaKnown RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 SCFD2Q8WU76 684 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 PCYT2Q99447 389 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 VPS16Q9H269 839 aa17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
CTNNA1-236ENST00000522792 IGKV6D-21A0A0A0MT36 114 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 A0A1B0GTH6 734 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 KIF20AO95235 890 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 TPM3P06753 285 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 MTERF2Q49AM1 385 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 ANKRD20A12PQ8NF67 263 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 SEPT1Q8WYJ6 367 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 HHIPL1Q96JK4 782 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 GPR20Q99678 358 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 KCTD10Q9H3F6 313 aa17.07■□□□□ 0.32
CTNNA1-236ENST00000522792 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.329e-8■■□□□ 13.4
CTNNA1-236ENST00000522792 TEX33O43247 280 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 HOXD13P35453 343 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 TM4SF4P48230 202 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 COPB1P53618 953 aaKnown RBP17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 KCNA1Q09470 495 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 NR1I3Q14994 352 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 FAM102BQ5T8I3 360 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 FIZ1Q96SL8 496 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 VTA1Q9NP79 307 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 ARID2Q68CP9 1835 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 ZNF236Q9UL36 1845 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 OATP04181 439 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 ADCYAP1R1P41586 468 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 ARID5BQ14865 1188 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 MORN1Q5T089 497 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 MAMDC4Q6UXC1 1216 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 VSTM4Q8IW00 320 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 TINF2Q9BSI4 451 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 KATNBL1Q9H079 304 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 CYP26B1Q9NR63 512 aa17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
CTNNA1-236ENST00000522792 N4BP3O15049 544 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 AOC2O75106 756 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 EEF1GP26641 437 aaKnown RBP17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 STAT5BP51692 787 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 SOX10P56693 466 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms