RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 GLI2P10070 1586 aa3.54□□□□□ -1.84
CKS1BP7-201ENST00000522230 EFCAB6Q5THR3 1501 aa3.54□□□□□ -1.84
CKS1BP7-201ENST00000522230 SPATA31E1Q6ZUB1 1445 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 CNTLNQ9NXG0 1405 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 DISP3Q9P2K9 1392 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 DEPDC5O75140 1603 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 CAMSAP1Q5T5Y3 1602 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PRAMEF25A6NGN4 478 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 H7C1D1 291 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 ACOT7O00154 380 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 HGSO14964 777 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 ZEB2O60315 1214 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 MARCH6O60337 910 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 BRINP1O60477 761 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 BUB1BO60566 1050 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PARNO95453 639 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 MT-CO1P00395 513 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 MMEP08473 750 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 CPEP16870 476 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PTPN1P18031 435 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PDE6BP35913 854 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 IARSP41252 1262 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 STAT5AP42229 794 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PRR5P85299 388 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 IDI1Q13907 227 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 LRRC41Q15345 812 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 DDB1Q16531 1140 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 FIGNQ5HY92 759 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 CC2D1BQ5T0F9 858 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 BROXQ5VW32 411 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 RNF219Q5W0B1 726 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 BTBD8Q5XKL5 378 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 IQSEC1Q6DN90 963 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 EP400NLQ6ZTU2 488 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 DCP2Q8IU60 420 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 FAM9BQ8IZU0 186 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 LILRA2Q8N149 483 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 FAM26EQ8N5C1 309 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 NETO2Q8NC67 525 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 FLAD1Q8NFF5 587 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 SEC14L1Q92503 715 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 RTF1Q92541 710 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 ERCC4Q92889 916 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 SLC5A5Q92911 643 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 CCDC120Q96HB5 630 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 INTS4Q96HW7 963 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 YIPF4Q9BSR8 244 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 AP5M1Q9H0R1 490 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 SEMA4AQ9H3S1 761 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 PCIF1Q9H4Z3 704 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 ZMAT4Q9H898 229 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 DBR1Q9UK59 544 aaKnown RBP3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 B3GALT1Q9Y5Z6 326 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 TRPM2O94759 1503 aa3.53□□□□□ -1.84
CKS1BP7-201ENST00000522230 TRPM1Q7Z4N2 1603 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 RNF17Q9BXT8 1623 aaKnown RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 EIF2AK4Q9P2K8 1649 aaKnown RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 TNKSO95271 1327 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SYNMO15061 1565 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 VWDEQ8N2E2 1590 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ALG1L2C9J202 215 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 GABRDO14764 452 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SRGAP3O43295 1099 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 HIP1RO75146 1068 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 H2AFYO75367 372 aaKnown RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ALDH1L1O75891 902 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 C4BPAP04003 597 aaKnown RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 CYBBP04839 570 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 PMLP29590 882 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 MC4RP32245 332 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ARL4AP40617 200 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 AFMP43652 599 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SLC6A11P48066 632 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SCAND1P57086 179 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 EXOSC10Q01780 885 aaKnown RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 TTF1Q15361 905 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ARHGAP44Q17R89 818 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 PLEKHN1Q494U1 663 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 CATSPEREQ5SY80 951 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ARTNQ5T4W7 220 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 PHF19Q5T6S3 580 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 PAQR3Q6TCH7 311 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 NECAB2Q7Z6G3 386 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 C11orf74Q86VG3 221 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 CBARPQ8N350 705 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 EFHBQ8N7U6 833 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 PANK1Q8TE04 598 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 TGFBRAP1Q8WUH2 860 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 DLG3Q92796 817 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 LIN37Q96GY3 246 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 CEP89Q96ST8 783 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SMOC1Q9H4F8 434 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 TOPORSQ9NS56 1045 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 C14orf119Q9NWQ9 140 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 KLHL14Q9P2G3 628 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF652Q9Y2D9 606 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 SPO11Q9Y5K1 396 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 CLTCQ00610 1675 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms