RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 B4GALT4O60513 344 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 AMY2AP04746 511 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 AMY2BP19961 511 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 EPHB4P54760 987 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 JAM2P57087 298 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 CXXC5Q7LFL8 322 aaKnown RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 CIR1Q86X95 450 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 DRC1Q96MC2 740 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 DNAJC2Q99543 621 aaKnown RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 TACO1Q9BSH4 297 aaKnown RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 CELF4Q9BZC1 486 aaKnown RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 SLC39A2Q9NP94 309 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 FBXO10Q9UK96 956 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 PTCH2Q9Y6C5 1203 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 DIP2BQ9P265 1576 aa4.65□□□□□ -1.66
VPS13B-209ENST00000521559 NCOA2Q15596 1464 aa4.65□□□□□ -1.66
VPS13B-209ENST00000521559 PLD2O14939 933 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 HIP1RO75146 1068 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 PTGS1P23219 599 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 POLD1P28340 1107 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 USP10Q14694 798 aaKnown RBP4.65□□□□□ -1.67
VPS13B-209ENST00000521559 PHF19Q5T6S3 580 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 SLC7A14Q8TBB6 771 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 CARD11Q9BXL7 1154 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 KATNBL1Q9H079 304 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 SEC61A2Q9H9S3 476 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 GALNT8Q9NY28 637 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 MYRFQ9Y2G1 1151 aa4.65□□□□□ -1.67
VPS13B-209ENST00000521559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS13B-209ENST00000521559 GPATCH8Q9UKJ3 1502 aaKnown RBP4.65□□□□□ -1.67
VPS13B-209ENST00000521559 AKNAQ7Z591 1439 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 TEX14Q8IWB6 1497 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 EHBP1L1Q8N3D4 1523 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 SLC12A8A0AV02 714 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 IL18BPO95998 194 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 AOAHP28039 575 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 ADAM17P78536 824 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 NFKB2Q00653 900 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 ARHGAP44Q17R89 818 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 ZXDCQ2QGD7 858 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-209ENST00000521559 WDR72Q3MJ13 1102 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 CPZQ66K79 652 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 DDX53Q86TM3 631 aaKnown RBP4.64□□□□□ -1.67
VPS13B-209ENST00000521559 C2orf69Q8N8R5 385 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 UBXN4Q92575 508 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 SCYL1Q96KG9 808 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 CDK5RAP1Q96SZ6 601 aaKnown RBP4.64□□□□□ -1.67
VPS13B-209ENST00000521559 NCOA5Q9HCD5 579 aaKnown RBP4.64□□□□□ -1.67
VPS13B-209ENST00000521559 SMURF1Q9HCE7 757 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 INCENPQ9NQS7 918 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 KCNH7Q9NS40 1196 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 PPP4R1LQ9P1A2 415 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 SLC4A7Q9Y6M7 1214 aa4.64□□□□□ -1.67
VPS13B-209ENST00000521559 ZNF644Q9H582 1327 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-209ENST00000521559 FANCAO15360 1455 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 NEO1Q92859 1461 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 ARAP3Q8WWN8 1544 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 TCRBV16S1A1N1A0A5B0 115 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 RASGRP1O95267 797 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 RAPGEF3O95398 923 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 C4BPAP04003 597 aaKnown RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 CSF2RBP32927 897 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 HNRNPMP52272 730 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 BMS1Q14692 1282 aaKnown RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 FNDC3BQ53EP0 1204 aaKnown RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 ZMAT1Q5H9K5 638 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 BRAPQ7Z569 592 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 LILRB2Q8N423 598 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 AFAP1Q8N556 730 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 CISD2Q8N5K1 135 aaKnown RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 CALML6Q8TD86 181 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 DVL3Q92997 716 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-209ENST00000521559 BTBD2Q9BX70 525 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 C1QTNF3Q9BXJ4 246 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 COQ6Q9Y2Z9 468 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 ASB1Q9Y576 335 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 KIF14Q15058 1648 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 ABCA9Q8IUA7 1624 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 MYOM3Q5VTT5 1437 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 MIA2Q96PC5 1412 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 SCAPERQ9BY12 1400 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 KIAA1107Q9UPP5 1409 aa4.63□□□□□ -1.67
VPS13B-209ENST00000521559 ESYT3A0FGR9 886 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 SCDO00767 359 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 FOXP2O15409 715 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 FLT3P36888 993 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 TOP3AQ13472 1001 aaPredicted RBP4.62□□□□□ -1.67
VPS13B-209ENST00000521559 FAM50AQ14320 339 aaKnown RBP4.62□□□□□ -1.67
VPS13B-209ENST00000521559 HS1BP3Q53T59 392 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 OVCH1Q7RTY7 1134 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 HIPK4Q8NE63 616 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 E2F7Q96AV8 911 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 SCLYQ96I15 445 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 WNK4Q96J92 1243 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms