RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 SORBS3O60504 671 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 PSAPP07602 524 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 THPOP40225 353 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 TRIM29Q14134 588 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 TRIM71Q2Q1W2 868 aaKnown RBP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 PRR16Q569H4 304 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 FAM26DQ5JW98 314 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 IER5Q5VY09 327 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 ABHD15Q6UXT9 468 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 USP38Q8NB14 1042 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 CYP2W1Q8TAV3 490 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 LMBR1Q8WVP7 490 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 FAM167AQ96KS9 214 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 LLPHQ9BRT6 129 aaKnown RBP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 BCAS3Q9H6U6 928 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 SLC28A3Q9HAS3 691 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 SETD4Q9NVD3 440 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 TUBE1Q9UJT0 475 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 WDR64B1ANS9 1081 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 M0QZ92 97 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 M0R2N6 131 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 BACH1O14867 736 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 JAK3P52333 1124 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ITGB3BPQ13352 177 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 GRIK4Q16099 956 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ZNF484Q5JVG2 852 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ODR4Q5SWX8 454 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 SEPT8Q92599 483 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 PBX4Q9BYU1 374 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ZNF302Q9NR11 478 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 ORC3Q9UBD5 711 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-204ENST00000521283 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
TRIM35-204ENST00000521283 TBX3O15119 743 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 DKC1O60832 514 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIM35-204ENST00000521283 GAS7O60861 476 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 CFHP08603 1231 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
TRIM35-204ENST00000521283 ME3Q16798 604 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 MBOAT7Q96N66 472 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 TEKT3Q9BXF9 490 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 ZNF576Q9H609 170 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 NRBP2Q9NSY0 501 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 CXXC1Q9P0U4 656 aaPredicted RBP11.52□□□□□ -0.57
TRIM35-204ENST00000521283 SAMM50Q9Y512 469 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.57
TRIM35-204ENST00000521283 WDR81Q562E7 1941 aa11.52□□□□□ -0.57
TRIM35-204ENST00000521283 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 SMIM35A0A1B0GVV1 85 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 MAGEB2O15479 319 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 NBNO60934 754 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 AMHP03971 560 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 INSRRP14616 1297 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 KRT2P35908 639 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 HMGN5P82970 282 aaKnown RBP11.51□□□□□ -0.57
TRIM35-204ENST00000521283 ZNF200P98182 395 aaPredicted RBP11.51□□□□□ -0.57
TRIM35-204ENST00000521283 CDC42EP1Q00587 391 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM35-204ENST00000521283 C8orf34Q49A92 452 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 PLEKHG4Q58EX7 1191 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 NEK8Q86SG6 692 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 EXOC8Q8IYI6 725 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 SLC5A5Q92911 643 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 LENG9Q96B70 501 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 GAS2L1Q99501 681 aaPredicted RBP11.51□□□□□ -0.57
TRIM35-204ENST00000521283 KIF3AQ9Y496 699 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 GBF1Q92538 1859 aa11.51□□□□□ -0.57
TRIM35-204ENST00000521283 MSH4O15457 936 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 BAG4O95429 457 aaKnown RBP11.5□□□□□ -0.57
TRIM35-204ENST00000521283 CCNE2O96020 404 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 MARK3P27448 753 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 TMOD1P28289 359 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 MCM2P49736 904 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 RABEP1Q15276 862 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 SWSAP1Q6NVH7 229 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms