RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 IGBP1P78318 339 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 INF2Q27J81 1249 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 FAM43BQ6ZT52 329 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 HERC6Q8IVU3 1022 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 CCDC60Q8IWA6 550 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 NME8Q8N427 588 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 DBF4BQ8NFT6 615 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 RDM1Q8NG50 284 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 SEPT8Q92599 483 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 APBB2Q92870 758 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 TEKT3Q9BXF9 490 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 SLC28A3Q9HAS3 691 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 TTC3P53804 2025 aa11.76□□□□□ -0.53
TRAPPC9-209ENST00000521167 SIP14410 1827 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 SMIM35A0A1B0GVV1 85 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 PSMD10O75832 226 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 CHRNA1P02708 482 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 ATP4AP20648 1035 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 KRT2P35908 639 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 JAK3P52333 1124 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 LRCH2Q5VUJ6 765 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 IER5Q5VY09 327 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 MTHFD1LQ6UB35 978 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 DNAJB3Q8WWF6 145 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 FAM20AQ96MK3 541 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 UIMC1Q96RL1 719 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 NKX2-4Q9H2Z4 354 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 DDX25Q9UHL0 483 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 YBX2Q9Y2T7 364 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 SAMM50Q9Y512 469 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 SQORQ9Y6N5 450 aa11.75□□□□□ -0.53
TRAPPC9-209ENST00000521167 TBX3O15119 743 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 TDP2O95551 362 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 CTSHP09668 335 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 KLRC1P26715 233 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 RABGGTBP53611 331 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 MRPS6P82932 125 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 MGAT3Q09327 533 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 TRIM29Q14134 588 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 RABEP1Q15276 862 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 PIK3AP1Q6ZUJ8 805 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 GABBR1Q9UBS5 961 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 CEP131Q9UPN4 1083 aa11.74□□□□□ -0.53
TRAPPC9-209ENST00000521167 M0QZ92 97 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 MAGEB2O15479 319 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 JAK2O60674 1132 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 DTNBO60941 627 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 MMP1P03956 469 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 AMHP03971 560 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 HMGN5P82970 282 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 KRT40Q6A162 431 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 CCDC83Q8IWF9 413 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 RAD9AQ99638 391 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 ZBED2Q9BTP6 218 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 KCNMB3Q9NPA1 279 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 KDM3AQ9Y4C1 1321 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 CDY2AQ9Y6F7 541 aa11.73□□□□□ -0.53
TRAPPC9-209ENST00000521167 ZBTB42B2RXF5 422 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 TLL1O43897 1013 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 CCNT1O60563 726 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 GJB5O95377 273 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 MYOGP15173 224 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 FOSL2P15408 326 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 DEFB103AP81534 67 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 NR5A1Q13285 461 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 LPIN1Q14693 890 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 FBXO47Q5MNV8 452 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
TRAPPC9-209ENST00000521167 KIAA0319LQ8IZA0 1049 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms