RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, human

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13B-208	ENST00000521037	PLBD2	Q8NHP8	589 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	TIFA	Q96CG3	184 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	KCNC2	Q96PR1	638 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	PLEKHF1	Q96S99	279 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	PARK7	Q99497	189 aa	Known RBP	4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	WNT10A	Q9GZT5	417 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	IRF2BPL	Q9H1B7	796 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	ADAMTS10	Q9H324	1103 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	GREM2	Q9H772	168 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	FLRT1	Q9NZU1	646 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	SLAMF8	Q9P0V8	285 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	ZSWIM5	Q9P217	1185 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	TMEM59L	Q9UK28	342 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	YBX2	Q9Y2T7	364 aa	Known RBP	4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	PTPRF	P10586	1907 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	CHD8	Q9HCK8	2581 aa		4.97	□□□□□ -1.61
VPS13B-208	ENST00000521037	DLG5	Q8TDM6	1919 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	ZDBF2	Q9HCK1	2354 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	EPOP	A6NHQ4	379 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	U2SURP	O15042	1029 aa	Known RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	NUAK1	O60285	661 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	FOXD2	O60548	495 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	TCF15	Q12870	199 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	MRPL58	Q14197	206 aa	Known RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	TREML2	Q5T2D2	321 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	LETMD1	Q6P1Q0	360 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	TMC7	Q7Z402	723 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	ANKRD13C	Q8N6S4	541 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	SPATA32	Q96LK8	384 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	MIPEP	Q99797	713 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	OSBPL7	Q9BZF2	842 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	TPX2	Q9ULW0	747 aa	Known RBP	4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	SLC45A1	Q9Y2W3	748 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	AFG3L2	Q9Y4W6	797 aa		4.96	□□□□□ -1.62
VPS13B-208	ENST00000521037	AK9	Q5TCS8	1911 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	SPEF2	Q9C093	1822 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	PLXNA3	P51805	1871 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CXCL11	O14625	94 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	SCAMP3	O14828	347 aa	Known RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CST3	P01034	146 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	PCCA	P05165	728 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	EIF2S2	P20042	333 aa	Known RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TRHR	P34981	398 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CDK8	P49336	464 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CASP7	P55210	303 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TAGLN	Q01995	201 aa	Known RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	ENOX2	Q16206	610 aa	Known RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	FAM110C	Q1W6H9	321 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TSNAXIP1	Q2TAA8	658 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TRIM60	Q495X7	471 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	KRT40	Q6A162	431 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	SLC39A5	Q6ZMH5	540 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	MIGA2	Q7L4E1	593 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TMPRSS7	Q7RTY8	843 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	ANKRD18A	Q8IVF6	992 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	ZFPM1	Q8IX07	1006 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	GAL3ST3	Q96A11	431 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	PLPPR2	Q96GM1	343 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CEP44	Q9C0F1	390 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	KCNH6	Q9H252	994 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	TXNRD2	Q9NNW7	524 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	GCM1	Q9NP62	436 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	PICK1	Q9NRD5	415 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CHPF2	Q9P2E5	772 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	PPM1H	Q9ULR3	514 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	CYP8B1	Q9UNU6	501 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	MTCH2	Q9Y6C9	303 aa		4.95	□□□□□ -1.62
VPS13B-208	ENST00000521037	NCOR2	Q9Y618	2525 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	CACNA1B	Q00975	2339 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	COL4A6	Q14031	1691 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	KIAA0355	O15063	1070 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	PDE8A	O60658	829 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	CBX7	O95931	251 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	IGKV5-2	P06315	115 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	RAC2	P15153	192 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	KIR3DL1	P43629	444 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	DLG4	P78352	724 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	LRRC14	Q15048	493 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	CCDC152	Q4G0S7	254 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	TIGD5	Q53EQ6	642 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	CCDC84	Q86UT8	332 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	FAM83A	Q86UY5	434 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	TDRD7	Q8NHU6	1098 aa	Known RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	PIWIL2	Q8TC59	973 aa	Known RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	PNISR	Q8TF01	805 aa	Known RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	COX4I2	Q96KJ9	171 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	RNPC3	Q96LT9	517 aa	Known RBP	4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037		Q96M66	194 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	RNF32	Q9H0A6	362 aa		4.94	□□□□□ -1.62
VPS13B-208	ENST00000521037	MORF4L1	Q9UBU8	362 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms