RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 POU3F3P20264 500 aaPredicted RBP20.41■□□□□ 0.86
VEGFA-222ENST00000520948 GRB10Q13322 594 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 MFSD10Q14728 455 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 TCTN1Q2MV58 587 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 UTP14CQ5TAP6 766 aaKnown RBP20.41■□□□□ 0.86
VEGFA-222ENST00000520948 MIS18BP1Q6P0N0 1132 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 KATNAL1Q9BW62 490 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 SMARCAD1Q9H4L7 1026 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
VEGFA-222ENST00000520948 MAFBQ9Y5Q3 323 aaPredicted RBP20.41■□□□□ 0.86
VEGFA-222ENST00000520948 WDR64B1ANS9 1081 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 LAD1O00515 517 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 NBNO60934 754 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 F13A1P00488 732 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 PSAPP07602 524 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 OR52Z1P0C646 297 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 TXKP42681 527 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 STAT5BP51692 787 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 JAK3P52333 1124 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 ATP2C1P98194 919 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-222ENST00000520948 KIAA0753Q2KHM9 967 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 AAK1Q2M2I8 961 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 SWSAP1Q6NVH7 229 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 CNKSR3Q6P9H4 555 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 TRIM50Q86XT4 487 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 CCDC60Q8IWA6 550 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-222ENST00000520948 WNT8BQ93098 351 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 ZBED2Q9BTP6 218 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 RNPEPQ9H4A4 650 aa20.4■□□□□ 0.86
VEGFA-222ENST00000520948 RBM19Q9Y4C8 960 aaKnown RBP20.4■□□□□ 0.86
VEGFA-222ENST00000520948 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.86
VEGFA-222ENST00000520948 MARCH6O60337 910 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 ATP4AP20648 1035 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.85
VEGFA-222ENST00000520948 PRPHP41219 470 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
VEGFA-222ENST00000520948 MIER3Q7Z3K6 550 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 GDPD5Q8WTR4 605 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 TCEAL9Q9UHQ7 104 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
VEGFA-222ENST00000520948 CHMP2AO43633 222 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 HOXC8P31273 242 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 SLC26A2P50443 739 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 RBL2Q08999 1139 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 EPHA7Q15375 998 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 IL17AQ16552 155 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 AZI2Q9H6S1 392 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 ZNF302Q9NR11 478 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 ERAP1Q9NZ08 941 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 ZNF215Q9UL58 517 aaPredicted RBP20.38■□□□□ 0.85
VEGFA-222ENST00000520948 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
VEGFA-222ENST00000520948 IGSF9BQ9UPX0 1349 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 LPXNO60711 386 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 CXCL10P02778 98 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.856e-18■■■□□ 18.2
VEGFA-222ENST00000520948 HIC1Q14526 733 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 PDIA5Q14554 519 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 PLCB4Q15147 1175 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 PTPAQ15257 358 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 SF3A1Q15459 793 aaKnown RBP20.37■□□□□ 0.85
VEGFA-222ENST00000520948 ZNF618Q5T7W0 954 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 FAM160B1Q5W0V3 765 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 FAM117BQ6P1L5 589 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 GLG1Q92896 1179 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 GABBR1Q9UBS5 961 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 MYH9P35579 1960 aaKnown RBP20.37■□□□□ 0.85
VEGFA-222ENST00000520948 SIP14410 1827 aa20.37■□□□□ 0.85
VEGFA-222ENST00000520948 ZNF862O60290 1169 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 TECP42680 631 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 ADAM17P78536 824 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 PTK7Q13308 1070 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 TRIM71Q2Q1W2 868 aaKnown RBP20.36■□□□□ 0.85
VEGFA-222ENST00000520948 FOXD4L5Q5VV16 416 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-222ENST00000520948 ARL6IP4Q66PJ3 421 aaKnown RBP20.36■□□□□ 0.85
VEGFA-222ENST00000520948 TRAF7Q6Q0C0 670 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 IGSF22Q8N9C0 903 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 FOXD4L4Q8WXT5 416 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-222ENST00000520948 USP28Q96RU2 1077 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 HSD17B14Q9BPX1 270 aa20.36■□□□□ 0.85
VEGFA-222ENST00000520948 MORC2Q9Y6X9 1032 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-222ENST00000520948 BACH1O14867 736 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 STBD1O95210 358 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 PARNO95453 639 aaKnown RBP20.35■□□□□ 0.85
VEGFA-222ENST00000520948 BMP15O95972 392 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 SMIM10L2AP0DMW4 78 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 SMIM10L2BP0DMW5 78 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 MBTPS1Q14703 1052 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 UGCGQ16739 394 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 NCAPH2Q6IBW4 605 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 PDXDC2PQ6P474 469 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 COG5Q9UP83 839 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 NCOR1O75376 2440 aa20.35■□□□□ 0.85
VEGFA-222ENST00000520948 ABHD14A-ACY1A0A1B0GW23 586 aa20.34■□□□□ 0.85
VEGFA-222ENST00000520948 POTEMA6NI47 508 aa20.34■□□□□ 0.85
VEGFA-222ENST00000520948 SLITRK3O94933 977 aa20.34■□□□□ 0.85
VEGFA-222ENST00000520948 GJB5O95377 273 aa20.34■□□□□ 0.85
VEGFA-222ENST00000520948 P4HBP07237 508 aaKnown RBP20.34■□□□□ 0.85
VEGFA-222ENST00000520948 MARK3P27448 753 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms