RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CYP2W1Q8TAV3 490 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 MRPS27Q92552 414 aaKnown RBP9.23□□□□□ -0.93
CSMD1-209ENST00000520630 FAM227BQ96M60 508 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 PCYT2Q99447 389 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 DLGAP2Q9P1A6 1054 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 TUBE1Q9UJT0 475 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 LZTS1Q9Y250 596 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 PCDHB12Q9Y5F1 795 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 SQORQ9Y6N5 450 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 KIF26AQ9ULI4 1882 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 C2orf71A6NGG8 1288 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 TBKBP1A7MCY6 615 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 C9IYK1 514 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 CLASP2O75122 1294 aaKnown RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 CDC45O75419 566 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 TCF7P36402 384 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 ATXN1P54253 815 aaKnown RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 SP4Q02446 784 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 MAML2Q8IZL2 1156 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 ENAHQ8N8S7 591 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 TRAPPC12Q8WVT3 735 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 RIN2Q8WYP3 895 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 TCF25Q9BQ70 676 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 FTHL17Q9BXU8 183 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 SEMA4AQ9H3S1 761 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 MFSD1Q9H3U5 465 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 MAP3K20Q9NYL2 800 aaKnown RBP9.22□□□□□ -0.93
CSMD1-209ENST00000520630 ZMYM6O95789 1325 aa9.22□□□□□ -0.93
CSMD1-209ENST00000520630 POTEMA6NI47 508 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 CYTH3O43739 400 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 N4BP1O75113 896 aaKnown RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 EOMESO95936 686 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 STAG3L1P0CL83 205 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 FGFR1P11362 822 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 GLULP15104 373 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 KCNA2P16389 499 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 MARK3P27448 753 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 FAM189BP81408 668 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 ITIH3Q06033 890 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 NEDD9Q14511 834 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 RARS2Q5T160 578 aaKnown RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 KIAA1841Q6NSI8 718 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 THNSL1Q8IYQ7 743 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 SIX5Q8N196 739 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 KCNG4Q8TDN1 519 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 RILPL2Q969X0 211 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 NECTIN4Q96NY8 510 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 CASD1Q96PB1 797 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 CELF4Q9BZC1 486 aaKnown RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 FAM49AQ9H0Q0 323 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 RGS18Q9NS28 235 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 MAD2L2Q9UI95 211 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 DUSP12Q9UNI6 340 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 NOC2LQ9Y3T9 749 aaKnown RBP9.21□□□□□ -0.94
CSMD1-209ENST00000520630 PCDHA1Q9Y5I3 950 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 TRPV2Q9Y5S1 764 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 KDM3AQ9Y4C1 1321 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 VWA8A3KMH1 1905 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 ZFYVE26Q68DK2 2539 aa9.21□□□□□ -0.94
CSMD1-209ENST00000520630 SDK1Q7Z5N4 2213 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 COL4A2P08572 1712 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 FSD2A1L4K1 749 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 PALM3A6NDB9 673 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 SP9P0CG40 484 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 INSRRP14616 1297 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 EPCAMP16422 314 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 IBSPP21815 317 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 TGM1P22735 817 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 CHMLP26374 656 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 MTHFRP42898 656 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 IGBP1P78318 339 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 DSC3Q14574 896 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 ST3GAL2Q16842 350 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 SPOUT1Q5T280 376 aaKnown RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 SAMD3Q8N6K7 520 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 MRPL43Q8N983 215 aaKnown RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 TDRD5Q8NAT2 981 aaKnown RBP9.2□□□□□ -0.94
CSMD1-209ENST00000520630 SLC22A17Q8WUG5 538 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 CASP10Q92851 521 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 SENP7Q9BQF6 1050 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 RTP3Q9BQQ7 232 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 KCNK12Q9HB15 430 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 HELLSQ9NRZ9 838 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 ZSWIM5Q9P217 1185 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 USTQ9Y2C2 406 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 TICRRQ7Z2Z1 1910 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms