RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TUT1Q9H6E5 874 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 PSTPIP2Q9H939 334 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 THEGQ9P2T0 379 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 SEC63Q9UGP8 760 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 TELO2Q9Y4R8 837 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 MYO9BQ13459 2157 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 LCHNA4D1U4 455 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 RSPH10B2B2RC85 870 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 NOP56O00567 594 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 TREHO43280 583 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 EFCAB14O75071 495 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 LGR5O75473 907 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 GJB5O95377 273 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 RSPH10BP0C881 870 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 CALM1P0DP23 149 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 CALM2P0DP24 149 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 CALM3P0DP25 149 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 THPOP40225 353 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 IKBKEQ14164 716 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 BMP2KLQ5H9B9 411 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 SPRED2Q7Z698 418 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 NLRX1Q86UT6 975 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 SKAP1Q86WV1 359 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 RAB11FIP4Q86YS3 637 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 FANCBQ8NB91 859 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 TPCN2Q8NHX9 752 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 RAD9AQ99638 391 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 ANP32EQ9BTT0 268 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 LRRC2Q9BYS8 371 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 MAP4K5Q9Y4K4 846 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 PCDHGA11Q9Y5H2 935 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
CTNNA1-221ENST00000520339 LAMA4Q16363 1823 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 LPXNO60711 386 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 ATP9AO75110 1047 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 KCNA2P16389 499 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 ITGB5P18084 799 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 ADAM17P78536 824 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 EXOSC10Q01780 885 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 GRB10Q13322 594 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 KRT40Q6A162 431 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.717e-6■□□□□ 11.2
CTNNA1-221ENST00000520339 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 SIX5Q8N196 739 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 DBF4BQ8NFT6 615 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 SETD4Q9NVD3 440 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
CTNNA1-221ENST00000520339 VCANP13611 3396 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 EMSYQ7Z589 1322 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 SPTBN5Q9NRC6 3674 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 CAND2O75155 1236 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 GNAT1P11488 350 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 SEC13P55735 322 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 ERVK-21P61565 698 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 PLEKHG4Q58EX7 1191 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 UTP14CQ5TAP6 766 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 MICALL1Q8N3F8 863 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 GIMAP8Q8ND71 665 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 NEK1Q96PY6 1258 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 PCDHA6Q9UN73 950 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 PCDHA8Q9Y5H6 950 aa10.63□□□□□ -0.71
CTNNA1-221ENST00000520339 GSTTP1A0A1W2PQM5 241 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 LINC01553A4QN01 128 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SFI1A8K8P3 1242 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 TNFRSF10AO00220 468 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 DKK1O94907 266 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 BMP1P13497 986 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SP4Q02446 784 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 UBE2SQ16763 222 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SWI5Q1ZZU3 235 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 FAM26DQ5JW98 314 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 PHLDB3Q6NSJ2 640 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SYNE3Q6ZMZ3 975 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 DHX32Q7L7V1 743 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 RPAINQ86UA6 219 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 LMBR1Q8WVP7 490 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SEPT1Q8WYJ6 367 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SEPT8Q92599 483 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 CDHR1Q96JP9 859 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 ZNF215Q9UL58 517 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 BAZ2BQ9UIF8 2168 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-221ENST00000520339 PRUNE2Q8WUY3 3088 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TET1Q8NFU7 2136 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms