RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 LIMS1P48059 325 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 PFKPQ01813 784 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 ADCY1Q08828 1119 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 STRN3Q13033 797 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 CREB3L3Q68CJ9 461 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 FSTL4Q6MZW2 842 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 FKBP9P1Q75LS8 142 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZZZ3Q8IYH5 903 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 UBR7Q8N806 425 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 CHTF18Q8WVB6 975 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 ASB15Q8WXK1 588 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 PWWP2AQ96N64 755 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 SMPD4Q9NXE4 827 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 MCM8Q9UJA3 840 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 GOLGA6L22H0YM25 854 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 DVL2O14641 736 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 MMEP08473 750 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 IBSPP21815 317 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 TGM1P22735 817 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 PTGS1P23219 599 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 ADCYAP1R1P41586 468 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 EPHA7Q15375 998 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 CATSPEREQ5SY80 951 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 UBXN11Q5T124 520 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 GPR158Q5T848 1215 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 TMC5Q6UXY8 1006 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 LIPIQ6XZB0 460 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 STRA8Q7Z7C7 330 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 SAPCD2Q86UD0 394 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 FNIP1Q8TF40 1166 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZBTB8AQ96BR9 441 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 GPR101Q96P66 508 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 NOX5Q96PH1 765 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 GBP4Q96PP9 640 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 ELF4Q99607 663 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 BTBD7Q9P203 1132 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 ARHGAP20Q9P2F6 1191 aa4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 APOBEC2Q9Y235 224 aaKnown RBP4.6□□□□□ -1.67
HMGB1P41-201ENST00000520234 SH3D21A4FU49 640 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 NEMP1O14524 444 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 EYA4O95677 639 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 PLA2G1BP04054 148 aaKnown RBP4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 SLC9A1P19634 815 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 THBS2P35442 1172 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 ACVRL1P37023 503 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 PHC1P78364 1004 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 FAPQ12884 760 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 ADAM9Q13443 819 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 LRRC32Q14392 662 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 PTPROQ16827 1216 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 SKIDA1Q1XH10 827 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 ATP13A4Q4VNC1 1196 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 DPP8Q6V1X1 898 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 TTLL7Q6ZT98 887 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 HIPK4Q8NE63 616 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 CALML6Q8TD86 181 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 C16orf92Q96LL3 132 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 INCENPQ9NQS7 918 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 TOMM22Q9NS69 142 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 GALNT8Q9NY28 637 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 COL4A3BPQ9Y5P4 624 aa4.59□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 RASSF10A6NK89 507 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 TGM5O43548 720 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 ULK1O75385 1050 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 FBXO21O94952 628 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 POU3F3P20264 500 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 CD40P25942 277 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 RPL13P26373 211 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 LSP1P33241 339 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 KCNC1P48547 511 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 SMAD3P84022 425 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 AMPD3Q01432 767 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 SMAD4Q13485 552 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 STAT4Q14765 748 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 SMAD2Q15796 467 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 RNF219Q5W0B1 726 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 CXXC5Q7LFL8 322 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZFPM1Q8IX07 1006 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZNF610Q8N9Z0 462 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 ATL2Q8NHH9 583 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 WDR48Q8TAF3 677 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 FOXB1Q99853 325 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 BTBD2Q9BX70 525 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 C1QTNF3Q9BXJ4 246 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 SLC39A2Q9NP94 309 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 EMC7Q9NPA0 242 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 SPTLC3Q9NUV7 552 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 H2AFY2Q9P0M6 372 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 NTMQ9P121 344 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 USP36Q9P275 1121 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 RBPJLQ9UBG7 517 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 WASF3Q9UPY6 502 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 ATP8A1Q9Y2Q0 1164 aa4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 NOP58Q9Y2X3 529 aaKnown RBP4.58□□□□□ -1.68
HMGB1P41-201ENST00000520234 PRAMEF22A3QJZ6 481 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 MPIG6BO95866 241 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 PTX3P26022 381 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 ECE1P42892 770 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms