RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C19orf44Q9H6X5 657 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 RCAN3Q9UKA8 241 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 ZBTB21Q9ULJ3 1066 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 MED26O95402 600 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 HSPA6P17066 643 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC5A3P53794 718 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 GRIN1Q05586 938 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 DBPQ10586 325 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC4A10Q6U841 1118 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 CILP2Q8IUL8 1156 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 HIPK4Q8NE63 616 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 RSAD2Q8WXG1 361 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 POFUT1Q9H488 388 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 BTBD7Q9P203 1132 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 PPP2R3BQ9Y5P8 575 aa6.88□□□□□ -1.31
HMGB1P46-201ENST00000520062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ZC3H12DA2A288 527 aaKnown RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 F8W031 263 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 PRLP01236 227 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 MPOP05164 745 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ASGR2P07307 311 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ROM1Q03395 351 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 BIRC2Q13490 618 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 PLCL1Q15111 1095 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 MIB1Q86YT6 1006 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 FAM126BQ8IXS8 530 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 SAMD3Q8N6K7 520 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 MORC4Q8TE76 937 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 SEMA4AQ9H3S1 761 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 MYH16Q9H6N6 1097 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ANLNQ9NQW6 1124 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 DTLQ9NZJ0 730 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 DBR1Q9UK59 544 aaKnown RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 NUMBLQ9Y6R0 609 aa6.87□□□□□ -1.31
HMGB1P46-201ENST00000520062 ST20-MTHFSA0A0A6YYL1 179 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 ELL2O00472 640 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 PRPF6O94906 941 aaKnown RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 FURINP09958 794 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 TRIM27P14373 513 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 TRHRP34981 398 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 MAPKAPK2P49137 400 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 ALDH6A1Q02252 535 aaKnown RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 CT83Q5H943 113 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 PITRM1Q5JRX3 1037 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 TOR2AQ5JU69 321 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 ZBTB41Q5SVQ8 909 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 KIAA1841Q6NSI8 718 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 MIER2Q8N344 545 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 AUTS2Q8WXX7 1259 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 RUNDC1Q96C34 613 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 EAF2Q96CJ1 260 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 TOE1Q96GM8 510 aaKnown RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 RPS6KC1Q96S38 1066 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 ANO3Q9BYT9 981 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 QRSL1Q9H0R6 528 aaKnown RBP6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC12A5Q9H2X9 1139 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
HMGB1P46-201ENST00000520062 PRSS38A1L453 326 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 OFD1O75665 1012 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 C5AR1P21730 350 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 SSTR4P31391 388 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 MYBPC3Q14896 1274 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 MUM1Q2TAK8 710 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 ANO4Q32M45 955 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 IFIT1BQ5T764 474 aaKnown RBP6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 PPP4R4Q6NUP7 873 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 CCDC62Q6P9F0 684 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 B3GNT9Q6UX72 402 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 KSR2Q6VAB6 950 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 ABHD4Q8TB40 342 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 ERCC4Q92889 916 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC39A13Q96H72 371 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 MYL10Q9BUA6 226 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 SARGQ9BW04 601 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 RXFP1Q9HBX9 757 aa6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 NGRNQ9NPE2 291 aaKnown RBP6.85□□□□□ -1.31
HMGB1P46-201ENST00000520062 PRAMEF22A3QJZ6 481 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 MAFGO15525 162 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 NDUFS2O75306 463 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 PTGS1P23219 599 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 PRR5P85299 388 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC6A3Q01959 620 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 ADCY2Q08462 1091 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 ARHGAP29Q52LW3 1261 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms