RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 COPS5Q92905 334 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
CLN8-204ENST00000519254 SEMA6BQ9H3T3 888 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
CLN8-204ENST00000519254 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 TSKSQ9UJT2 592 aa16.06■□□□□ 0.16
CLN8-204ENST00000519254 BICDL2A1A5D9 508 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 GPR25O00155 361 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 OFD1O75665 1012 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 FARP2O94887 1054 aaPredicted RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 ADCYAP1R1P41586 468 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 FLT3LGP49771 235 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 SMAP1Q8IYB5 467 aaPredicted RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 GUF1Q8N442 669 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 KCTD17Q8N5Z5 321 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 KATNBL1Q9H079 304 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 PCDHA2Q9Y5H9 948 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 P4HBP07237 508 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLN8-204ENST00000519254 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 UGCGQ16739 394 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
CLN8-204ENST00000519254 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 PIGOQ8TEQ8 1089 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 BEGAINQ9BUH8 593 aa16.05■□□□□ 0.16
CLN8-204ENST00000519254 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.04■□□□□ 0.16
CLN8-204ENST00000519254 BACH1O14867 736 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 EYA4O95677 639 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 PSAPP07602 524 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
CLN8-204ENST00000519254 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
CLN8-204ENST00000519254 GIT2Q14161 759 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 CELF3Q5SZQ8 465 aaKnown RBP16.04■□□□□ 0.16
CLN8-204ENST00000519254 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 MIS18BP1Q6P0N0 1132 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 CSGALNACT2Q8N6G5 542 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
CLN8-204ENST00000519254 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 TAB2Q9NYJ8 693 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 MYH11P35749 1972 aa16.04■□□□□ 0.16
CLN8-204ENST00000519254 NOP56O00567 594 aaKnown RBP16.03■□□□□ 0.16
CLN8-204ENST00000519254 ZBTB39O15060 712 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
CLN8-204ENST00000519254 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 LRRC41Q15345 812 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 SPATA33Q96N06 139 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 FGFBP2Q9BYJ0 223 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 VPS16Q9H269 839 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 N4BP3O15049 544 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 FKTNO75072 461 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 MUTP22033 750 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 PSMC5P62195 406 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
CLN8-204ENST00000519254 ABHD15Q6UXT9 468 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 CCDC60Q8IWA6 550 aaPredicted RBP16.03■□□□□ 0.16
CLN8-204ENST00000519254 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
CLN8-204ENST00000519254 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
CLN8-204ENST00000519254 RBM47A0AV96 593 aaKnown RBP16.02■□□□□ 0.15
CLN8-204ENST00000519254 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.15
CLN8-204ENST00000519254 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.15
CLN8-204ENST00000519254 SMPD1P17405 629 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 HSDL1Q3SXM5 330 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.15
CLN8-204ENST00000519254 CREBRFQ8IUR6 639 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 TRIB2Q92519 343 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 NACC1Q96RE7 527 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 REEP2Q9BRK0 252 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 RUSC1Q9BVN2 902 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 TBC1D7Q9P0N9 293 aa16.02■□□□□ 0.15
CLN8-204ENST00000519254 GSTTP1A0A1W2PQM5 241 aa16.01■□□□□ 0.15
CLN8-204ENST00000519254 TMEM150BA6NC51 233 aa16.01■□□□□ 0.15
CLN8-204ENST00000519254 GH1P01241 217 aa16.01■□□□□ 0.15
CLN8-204ENST00000519254 TCF7P36402 384 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms