RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 PLEKHG4Q58EX7 1191 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 ERICH6BQ5W0A0 696 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 KANK2Q63ZY3 851 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 SDE2Q6IQ49 451 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 CXXC5Q7LFL8 322 aaKnown RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 OTOP2Q7RTS6 562 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 PLEKHH3Q7Z736 793 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 RTN4RL1Q86UN2 441 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 REXO1L1PQ8IX06 675 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 PPM1KQ8N3J5 372 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 FOXRED1Q96CU9 486 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 KATNBL1Q9H079 304 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 IFT57Q9NWB7 429 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 THG1LQ9NWX6 298 aaKnown RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 CDC42EP3Q9UKI2 254 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 LAMTOR5O43504 91 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 CUTAO60888 179 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 F2P00734 622 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 PLATP00750 562 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 CYP17A1P05093 508 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 CELA3BP08861 270 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
SKP1-205ENST00000519054 FNTBP49356 437 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 RRADP55042 308 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
SKP1-205ENST00000519054 DSG1Q02413 1049 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 USP10Q14694 798 aaKnown RBP5.38□□□□□ -1.55
SKP1-205ENST00000519054 ARHGEF18Q6ZSZ5 1173 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 CALML6Q8TD86 181 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 ORAI3Q9BRQ5 295 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 CARD11Q9BXL7 1154 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 JADE2Q9NQC1 790 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 TOMM22Q9NS69 142 aa5.38□□□□□ -1.55
SKP1-205ENST00000519054 A0A087X0B3 334 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 GSG1L2A8MUP6 293 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 B8ZZF3 427 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 HMGCRP04035 888 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 APEX1P27695 318 aaKnown RBP5.37□□□□□ -1.55
SKP1-205ENST00000519054 ETV4P43268 484 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 RGS3P49796 1198 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 PPP2CBP62714 309 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 PPP2CAP67775 309 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 MOGSQ13724 837 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 ESRP1Q6NXG1 681 aaKnown RBP5.37□□□□□ -1.55
SKP1-205ENST00000519054 KIF18BQ86Y91 864 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 IFNL2Q8IZJ0 200 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 CHTF18Q8WVB6 975 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 C16orf92Q96LL3 132 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 FOXB1Q99853 325 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 ZDHHC5Q9C0B5 715 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.37□□□□□ -1.552e-6■■■□□ 18.4
SKP1-205ENST00000519054 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 SPO11Q9Y5K1 396 aa5.37□□□□□ -1.55
SKP1-205ENST00000519054 A0A0G2JNJ9 132 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
SKP1-205ENST00000519054 PDE8AO60658 829 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 PRLP01236 227 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 ITGB3P05106 788 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 HSD3B2P26439 372 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 SCNN1BP51168 640 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 ROM1Q03395 351 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 SART3Q15020 963 aaKnown RBP5.36□□□□□ -1.55
SKP1-205ENST00000519054 EPHA7Q15375 998 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 SURF1Q15526 300 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 TAF7LQ5H9L4 462 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 GRAMD4Q6IC98 578 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 LARP4Q71RC2 724 aaKnown RBP eCLIP5.36□□□□□ -1.55
SKP1-205ENST00000519054 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 LEO1Q8WVC0 666 aaPredicted RBP5.36□□□□□ -1.55
SKP1-205ENST00000519054 E2F7Q96AV8 911 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 GPR101Q96P66 508 aaPredicted RBP5.36□□□□□ -1.55
SKP1-205ENST00000519054 TUBGCP5Q96RT8 1024 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 PTPN18Q99952 460 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 KIAA1683Q9H0B3 1180 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
SKP1-205ENST00000519054 PPP4R1LQ9P1A2 415 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 Q9UFV3 132 aa5.36□□□□□ -1.55
SKP1-205ENST00000519054 K7ESM1 405 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
SKP1-205ENST00000519054 STAT5BP51692 787 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 KPNA1P52294 538 aaPredicted RBP5.35□□□□□ -1.55
SKP1-205ENST00000519054 IL2P60568 153 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 NOLC1Q14978 699 aaKnown RBP eCLIP5.35□□□□□ -1.55
SKP1-205ENST00000519054 EIF4HQ15056 248 aaKnown RBP5.35□□□□□ -1.55
SKP1-205ENST00000519054 ZNF568Q3ZCX4 644 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 PRAMEF9Q5VWM5 478 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 SLFN12LQ6IEE8 588 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 GLB1LQ6UWU2 654 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 FILIP1Q7Z7B0 1213 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 EFHBQ8N7U6 833 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 SMC1BQ8NDV3 1235 aa5.35□□□□□ -1.55
SKP1-205ENST00000519054 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms