RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CEACAM5P06731 702 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 SYN1P17600 705 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 APOBRQ0VD83 1088 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 SLC6A19Q695T7 634 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 PI4KAP1Q8N8J0 262 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
CCDC6-203ENST00000518638 RUNDC1Q96C34 613 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 ACSF2Q96CM8 615 aaPredicted RBP7.66□□□□□ -1.18
CCDC6-203ENST00000518638 FAM122AQ96E09 287 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 TMEM87BQ96K49 555 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 ZDHHC15Q96MV8 337 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 U3KQE9 123 aa7.66□□□□□ -1.18
CCDC6-203ENST00000518638 TAF5LO75529 589 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 LEFTY1O75610 366 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 HTR3BO95264 441 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 HIBADHP31937 336 aaKnown RBP7.65□□□□□ -1.18
CCDC6-203ENST00000518638 GNAI1P63096 354 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 AOX1Q06278 1338 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 RAD51AP2Q09MP3 1159 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 UBE4AQ14139 1066 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 FAM110CQ1W6H9 321 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 TAF7LQ5H9L4 462 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 PRAMEF13Q5VWM6 474 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 VPS37DQ86XT2 251 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 MCATQ8IVS2 390 aaKnown RBP7.65□□□□□ -1.18
CCDC6-203ENST00000518638 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 MFSD2AQ8NA29 543 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 DIS3LQ8TF46 1054 aaKnown RBP7.65□□□□□ -1.18
CCDC6-203ENST00000518638 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 IFT57Q9NWB7 429 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 REV1Q9UBZ9 1251 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 ZNF112Q9UJU3 913 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 OGDHLQ9ULD0 1010 aa7.65□□□□□ -1.18
CCDC6-203ENST00000518638 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 A0A0G2JLL6 359 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 FRAT2O75474 233 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 CYP2C8P10632 490 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 GCLCP48506 637 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 GCKRQ14397 625 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 CCDC57Q2TAC2 916 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 SEZ6Q53EL9 994 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 LDHAL6AQ6ZMR3 332 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 PRRT2Q7Z6L0 340 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 FAM151AQ8WW52 585 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 NKD1Q969G9 470 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 CDX2Q99626 313 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 TGIF2Q9GZN2 237 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 CNNM1Q9NRU3 951 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 JAG2Q9Y219 1238 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.64□□□□□ -1.19
CCDC6-203ENST00000518638 PTPRFP10586 1907 aa7.64□□□□□ -1.19
CCDC6-203ENST00000518638 CACNA1FO60840 1977 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 NFIBO00712 420 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 SLITRK5O94991 958 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 ATE1O95260 518 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 ZNF853P0CG23 659 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 OXCT1P55809 520 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 PABPC4Q13310 644 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC6-203ENST00000518638 MOGSQ13724 837 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 WDR43Q15061 677 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC6-203ENST00000518638 CAVIN4Q5BKX8 364 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 HHIPL2Q6UWX4 724 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 REXO1Q8N1G1 1221 aaKnown RBP7.63□□□□□ -1.19
CCDC6-203ENST00000518638 LINS1Q8NG48 757 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 PRDM7Q9NQW5 492 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 PCDHB14Q9Y5E9 798 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 DOCK2Q92608 1830 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 MAST2Q6P0Q8 1798 aa7.63□□□□□ -1.19
CCDC6-203ENST00000518638 PFASO15067 1338 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 SNAP23O00161 211 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 EOMESO95936 686 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 INHBBP09529 407 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 C1QTNF9P0C862 333 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 FOSL2P15408 326 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 ZNF165P49910 485 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 SMAD3P84022 425 aaKnown RBP7.62□□□□□ -1.19
CCDC6-203ENST00000518638 PAK2Q13177 524 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 RALBP1Q15311 655 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 MPZL3Q6UWV2 235 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 GADL1Q6ZQY3 521 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 MIGA2Q7L4E1 593 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 SCYL3Q8IZE3 742 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 FAM13CQ8NE31 585 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 MIPEPQ99797 713 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 EHMT1Q9H9B1 1298 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 PLAGL2Q9UPG8 496 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 AGTPBP1Q9UPW5 1226 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 DOCK1Q14185 1865 aa7.62□□□□□ -1.19
CCDC6-203ENST00000518638 DOCK3Q8IZD9 2030 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 KIF16BQ96L93 1317 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 MYH13Q9UKX3 1938 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 ELL2O00472 640 aaPredicted RBP7.61□□□□□ -1.19
CCDC6-203ENST00000518638 PLIN1O60240 522 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms