RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 TMCO2Q7Z6W1 182 aaPredicted RBP20.99■□□□□ 0.95
FAM49B-208ENST00000518344 KIAA0319LQ8IZA0 1049 aa20.99■□□□□ 0.95
FAM49B-208ENST00000518344 ZBED2Q9BTP6 218 aa20.99■□□□□ 0.95
FAM49B-208ENST00000518344 IFIH1Q9BYX4 1025 aaKnown RBP20.99■□□□□ 0.95
FAM49B-208ENST00000518344 SEPT9Q9UHD8 586 aaPredicted RBP20.99■□□□□ 0.95
FAM49B-208ENST00000518344 PCDHA12Q9UN75 941 aa20.99■□□□□ 0.95
FAM49B-208ENST00000518344 GINS2Q9Y248 185 aa20.99■□□□□ 0.95
FAM49B-208ENST00000518344 TRPV2Q9Y5S1 764 aa20.99■□□□□ 0.95
FAM49B-208ENST00000518344 TMEM265A0A087WTH1 108 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 DDX11L8A8MPP1 907 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 KIF28PB7ZC32 967 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 GJB2P29033 226 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 TXKP42681 527 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 PSMC5P62195 406 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 EPHA7Q15375 998 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 XKR3Q5GH77 459 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 FBXO47Q5MNV8 452 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.98■□□□□ 0.95
FAM49B-208ENST00000518344 NOSTRINQ8IVI9 506 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 APBB2Q92870 758 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 GUCD1Q96NT3 240 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 CELF4Q9BZC1 486 aaKnown RBP20.98■□□□□ 0.95
FAM49B-208ENST00000518344 SLC28A3Q9HAS3 691 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 SMC3Q9UQE7 1217 aa20.98■□□□□ 0.95
FAM49B-208ENST00000518344 TMEM150BA6NC51 233 aa20.97■□□□□ 0.95
FAM49B-208ENST00000518344 MAGEB2O15479 319 aa20.97■□□□□ 0.95
FAM49B-208ENST00000518344 P4HBP07237 508 aaKnown RBP20.97■□□□□ 0.95
FAM49B-208ENST00000518344 QARSP47897 775 aaKnown RBP20.97■□□□□ 0.95
FAM49B-208ENST00000518344 ZNF174Q15697 407 aa20.97■□□□□ 0.95
FAM49B-208ENST00000518344 FAM117BQ6P1L5 589 aa20.97■□□□□ 0.95
FAM49B-208ENST00000518344 PPP1R16BQ96T49 567 aa20.97■□□□□ 0.95
FAM49B-208ENST00000518344 CDX2Q99626 313 aaPredicted RBP20.97■□□□□ 0.95
FAM49B-208ENST00000518344 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
FAM49B-208ENST00000518344 LAMA2P24043 3122 aaKnown RBP20.97■□□□□ 0.95
FAM49B-208ENST00000518344 TLL1O43897 1013 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
FAM49B-208ENST00000518344 AMHP03971 560 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 GRIN2CQ14957 1233 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 MTERF2Q49AM1 385 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 MCTP1Q6DN14 999 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 EFCAB12Q6NXP0 572 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 TSHZ1Q6ZSZ6 1077 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 MYOCDQ8IZQ8 938 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 LRRC71Q8N4P6 559 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 MTMR9Q96QG7 549 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 SH2D3AQ9BRG2 576 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 NIFKQ9BYG3 293 aaKnown RBP20.96■□□□□ 0.95
FAM49B-208ENST00000518344 TTC12Q9H892 705 aaPredicted RBP20.96■□□□□ 0.95
FAM49B-208ENST00000518344 AGO3Q9H9G7 860 aaKnown RBP20.96■□□□□ 0.95
FAM49B-208ENST00000518344 SUGCTQ9HAC7 445 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 RGL1Q9NZL6 768 aa20.96■□□□□ 0.95
FAM49B-208ENST00000518344 NOL7Q9UMY1 257 aaKnown RBP20.96■□□□□ 0.95
FAM49B-208ENST00000518344 KAT6AQ92794 2004 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 TET1Q8NFU7 2136 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 H3BQV1 296 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 STBD1O95210 358 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 CA3P07451 260 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 TMOD1P28289 359 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 CD52P31358 61 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 CLCN3P51790 818 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 SPIRE1Q08AE8 756 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 TBC1D8BQ0IIM8 1120 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 TTC38Q5R3I4 469 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 PPP2R2DQ66LE6 453 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 DYDC2Q96IM9 177 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 TMEM60Q9H2L4 133 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 AKT3Q9Y243 479 aa20.95■□□□□ 0.94
FAM49B-208ENST00000518344 UPP2O95045 317 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 VTNP04004 478 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 U2AF2P26368 475 aaKnown RBP eCLIP20.94■□□□□ 0.94
FAM49B-208ENST00000518344 CYP4A11Q02928 519 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 CTTNQ14247 550 aaKnown RBP20.94■□□□□ 0.94
FAM49B-208ENST00000518344 KIZQ2M2Z5 673 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 TPH2Q8IWU9 490 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 USP38Q8NB14 1042 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 MYLIPQ8WY64 445 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 MAP7D2Q96T17 732 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 LXNQ9BS40 222 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 CDHR5Q9HBB8 845 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 SQORQ9Y6N5 450 aa20.94■□□□□ 0.94
FAM49B-208ENST00000518344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.93■□□□□ 0.94
FAM49B-208ENST00000518344 GJB5O95377 273 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 PAK2Q13177 524 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 MKRN4PQ13434 485 aaPredicted RBP20.93■□□□□ 0.94
FAM49B-208ENST00000518344 TARBP2Q15633 366 aaKnown RBP20.93■□□□□ 0.94
FAM49B-208ENST00000518344 TMEM266Q2M3C6 531 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 PLA2G4FQ68DD2 849 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 ANO5Q75V66 913 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 WRAP73Q9P2S5 460 aaPredicted RBP20.93■□□□□ 0.94
FAM49B-208ENST00000518344 PADI3Q9ULW8 664 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 STXBP5LQ9Y2K9 1186 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 KDM3AQ9Y4C1 1321 aa20.93■□□□□ 0.94
FAM49B-208ENST00000518344 RPS6KA5O75582 802 aa20.92■□□□□ 0.94
FAM49B-208ENST00000518344 SLITRK3O94933 977 aa20.92■□□□□ 0.94
FAM49B-208ENST00000518344 TRAPPC10P48553 1259 aa20.92■□□□□ 0.94
FAM49B-208ENST00000518344 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
FAM49B-208ENST00000518344 NBR1Q14596 966 aa20.92■□□□□ 0.94
FAM49B-208ENST00000518344 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
FAM49B-208ENST00000518344 RAD9AQ99638 391 aa20.92■□□□□ 0.94
FAM49B-208ENST00000518344 OSMRQ99650 979 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms