RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 ACAD9Q9H845 621 aa8.85□□□□□ -0.99
ARFGEF1-204ENST00000518290 RAVER2Q9HCJ3 691 aaKnown RBP8.85□□□□□ -0.99
ARFGEF1-204ENST00000518290 FAM53CQ9NYF3 392 aa8.85□□□□□ -0.99
ARFGEF1-204ENST00000518290 RALGAPA2Q2PPJ7 1873 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 ZNF76P36508 570 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 PRKCIP41743 596 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 EPS15P42566 896 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RARRES1P49788 294 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 CBX1P83916 185 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 TBC1D8BQ0IIM8 1120 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 OLIG1Q8TAK6 271 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 SIX2Q9NPC8 291 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RNF146Q9NTX7 359 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 WDR64B1ANS9 1081 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 P4HA2O15460 535 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 GFPT2O94808 682 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RFX1P22670 979 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 QARSP47897 775 aaKnown RBP8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 PSMC5P62195 406 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 PPIL2Q13356 520 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 VGLL4Q14135 290 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 MTF1Q14872 753 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 HSP90AA4PQ58FG1 418 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 HERC4Q5GLZ8 1057 aaPredicted RBP8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 STXBP4Q6ZWJ1 553 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RSRC2Q7L4I2 434 aaKnown RBP8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 TANGO6Q9C0B7 1094 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RGL1Q9NZL6 768 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 RIPK3Q9Y572 518 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 ZHX2Q9Y6X8 837 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 ANK1P16157 1881 aa8.84□□□□□ -0.99
ARFGEF1-204ENST00000518290 MARCH6O60337 910 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 SLU7O95391 586 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 CCNE2O96020 404 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 MYBP10242 640 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 MTIF2P46199 727 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 ZKSCAN4Q969J2 545 aaPredicted RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 TSGA10Q9BZW7 698 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 EPN1Q9Y6I3 576 aaPredicted RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 ANO9A1A5B4 782 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 COBLO75128 1261 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 NR3C1P04150 777 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 PLS3P13797 630 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 RPL13P26373 211 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 KRT83P78385 493 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 TCEAL1Q15170 157 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 PAPD7Q5XG87 772 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 NLRX1Q86UT6 975 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 TSC1Q92574 1164 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 SYT11Q9BT88 431 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 MOV10L1Q9BXT6 1211 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 AGPAT5Q9NUQ2 364 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 RSPH10B2B2RC85 870 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 CETN3O15182 167 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 EPHB6O15197 1021 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 TADA3O75528 432 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 RSPH10BP0C881 870 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 PRLRP16471 622 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 CTTNQ14247 550 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 ABHD15Q6UXT9 468 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 SHCBP1Q8NEM2 672 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 SLC35C1Q96A29 364 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 VTI1AQ96AJ9 217 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 RMDN3Q96TC7 470 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 TMEM206Q9H813 350 aa8.83□□□□□ -1
ARFGEF1-204ENST00000518290 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 MAFBQ9Y5Q3 323 aaPredicted RBP8.83□□□□□ -1
ARFGEF1-204ENST00000518290 EFCAB8A8MWE9 144 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 TBCAO75347 108 aaKnown RBP8.82□□□□□ -1
ARFGEF1-204ENST00000518290 PIGRP01833 764 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 ITIH3Q06033 890 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 DGKZQ13574 1117 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 ZYXQ15942 572 aaKnown RBP8.82□□□□□ -1
ARFGEF1-204ENST00000518290 SYT10Q6XYQ8 523 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 PAXIP1Q6ZW49 1069 aaPredicted RBP8.82□□□□□ -1
ARFGEF1-204ENST00000518290 MIER3Q7Z3K6 550 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 FMNL3Q8IVF7 1028 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 FBXL18Q96ME1 805 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 WDR24Q96S15 920 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
ARFGEF1-204ENST00000518290 TRMT1Q9NXH9 659 aaKnown RBP8.82□□□□□ -1
ARFGEF1-204ENST00000518290 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 TBC1D7Q9P0N9 293 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 RAD21O60216 631 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 NR3C2P08235 984 aa8.82□□□□□ -1
ARFGEF1-204ENST00000518290 ALAS1P13196 640 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms