RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 GIT2Q14161 759 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
PABPC1-203ENST00000517921 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-203ENST00000517921 ANO5Q75V66 913 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 RNF214Q8ND24 703 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 OR6J1Q8NGC5 347 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 PPTC7Q8NI37 304 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 AFG1LQ8WV93 481 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
PABPC1-203ENST00000517921 REEP2Q9BRK0 252 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-203ENST00000517921 GDAQ9Y2T3 454 aa11.76□□□□□ -0.53
PABPC1-203ENST00000517921 RSPH10B2B2RC85 870 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 GNRH1P01148 92 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 KRT18P05783 430 aaKnown RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 RSPH10BP0C881 870 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 IDEP14735 1019 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 HOXD10P28358 340 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 ZNF165P49910 485 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 STAT5BP51692 787 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 NPEPPSP55786 919 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 RAD51AP2Q09MP3 1159 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 MAPK7Q13164 816 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 XKR9Q5GH70 373 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 MFSD14CQ5VZR4 134 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 CCDC65Q8IXS2 484 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 TRMT44Q8IYL2 757 aaKnown RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 KIAA0895Q8NCT3 520 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 BPIFA3Q9BQP9 254 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 SH2D3AQ9BRG2 576 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-203ENST00000517921 PANK4Q9NVE7 773 aa11.75□□□□□ -0.53
PABPC1-203ENST00000517921 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
PABPC1-203ENST00000517921 LGALS2P05162 132 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 MMP3P08254 477 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 AKR1A1P14550 325 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 ELNP15502 786 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 ZNF131P52739 623 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 STK4Q13043 487 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 TRIM32Q13049 653 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 IQCB1Q15051 598 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 TRMT1LQ7Z2T5 733 aaKnown RBP11.74□□□□□ -0.53
PABPC1-203ENST00000517921 TLK2Q86UE8 772 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 DHX40Q8IX18 779 aaKnown RBP11.74□□□□□ -0.53
PABPC1-203ENST00000517921 HPS3Q969F9 1004 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 FAM167AQ96KS9 214 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 CCDC43Q96MW1 224 aaKnown RBP11.74□□□□□ -0.53
PABPC1-203ENST00000517921 CEP89Q96ST8 783 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
PABPC1-203ENST00000517921 SMARCAD1Q9H4L7 1026 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 AZI2Q9H6S1 392 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 GRPEL1Q9HAV7 217 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 CYP26B1Q9NR63 512 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 DACH1Q9UI36 760 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 FAM184BQ9ULE4 1060 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 ODF2LQ9ULJ1 636 aa11.74□□□□□ -0.53
PABPC1-203ENST00000517921 HIP1RO75146 1068 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
PABPC1-203ENST00000517921 FAM13AO94988 1023 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 HMGCRP04035 888 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 MARK3P27448 753 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 PRCPP42785 496 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-203ENST00000517921 PLCB4Q15147 1175 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
PABPC1-203ENST00000517921 MTERF2Q49AM1 385 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 SLC9C1Q4G0N8 1177 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 COBLL1Q53SF7 1204 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 FAM26FQ5R3K3 315 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 LUZP1Q86V48 1076 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 DAW1Q8N136 415 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 ADSSL1Q8N142 457 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 AOPEPQ8N6M6 819 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 GLG1Q92896 1179 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 FGFBP2Q9BYJ0 223 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 GTPBP4Q9BZE4 634 aaKnown RBP11.73□□□□□ -0.53
PABPC1-203ENST00000517921 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
PABPC1-203ENST00000517921 SLC39A2Q9NP94 309 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 Q9Y3F1 56 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 PCDHA2Q9Y5H9 948 aa11.73□□□□□ -0.53
PABPC1-203ENST00000517921 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms