RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 SLITRK3O94933 977 aa23.72■■□□□ 1.39
MTCL1-204ENST00000517554 PLEKHG4Q58EX7 1191 aa23.72■■□□□ 1.39
MTCL1-204ENST00000517554 CNKSR3Q6P9H4 555 aa23.72■■□□□ 1.39
MTCL1-204ENST00000517554 HSD17B14Q9BPX1 270 aa23.72■■□□□ 1.39
MTCL1-204ENST00000517554 ZBBXA8MT70 800 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 ZBTB39O15060 712 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 OR52Z1P0C646 297 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 MRPS6P82932 125 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 SMAD3P84022 425 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 CYP4A11Q02928 519 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 MKRN4PQ13434 485 aaPredicted RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 CTTNQ14247 550 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 RSPH3Q86UC2 560 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 ZNF579Q8NAF0 562 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 EIF2AK1Q9BQI3 630 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 LXNQ9BS40 222 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 SEPT9Q9UHD8 586 aaPredicted RBP23.71■■□□□ 1.39
MTCL1-204ENST00000517554 CEP131Q9UPN4 1083 aa23.71■■□□□ 1.39
MTCL1-204ENST00000517554 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.7■■□□□ 1.38
MTCL1-204ENST00000517554 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.7■■□□□ 1.38
MTCL1-204ENST00000517554 LPIN1Q14693 890 aa23.7■■□□□ 1.38
MTCL1-204ENST00000517554 PLA2G4FQ68DD2 849 aa23.7■■□□□ 1.38
MTCL1-204ENST00000517554 CDHR5Q9HBB8 845 aa23.7■■□□□ 1.38
MTCL1-204ENST00000517554 DDX11L8A8MPP1 907 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 GHRP10912 638 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 ACTN1P12814 892 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 SYT1P21579 422 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 PBX2P40425 430 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 TECP42680 631 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 CLCN3P51790 818 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 MTERF2Q49AM1 385 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 FBXO47Q5MNV8 452 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 C4orf19Q8IY42 314 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 LRRC71Q8N4P6 559 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 SLC4A7Q9Y6M7 1214 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 NPEPPSP55786 919 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 PTGDRQ13258 359 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 DRP2Q13474 957 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 NME8Q8N427 588 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 METTL13Q8N6R0 699 aa23.69■■□□□ 1.38
MTCL1-204ENST00000517554 MTIF3Q9H2K0 278 aaKnown RBP23.69■■□□□ 1.38
MTCL1-204ENST00000517554 AGO3Q9H9G7 860 aaKnown RBP23.69■■□□□ 1.38
MTCL1-204ENST00000517554 MAGEB2O15479 319 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 BAIAP3O94812 1187 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 SPATA31C1P0DKV0 1188 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 WDR5P61964 334 aaKnown RBP23.68■■□□□ 1.38
MTCL1-204ENST00000517554 IL17AQ16552 155 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 RILPL1Q5EBL4 403 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 EFCAB12Q6NXP0 572 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 FERMT3Q86UX7 667 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 PBX4Q9BYU1 374 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 CELF4Q9BZC1 486 aaKnown RBP23.68■■□□□ 1.38
MTCL1-204ENST00000517554 TRPV2Q9Y5S1 764 aa23.68■■□□□ 1.38
MTCL1-204ENST00000517554 KDM3AQ9Y4C1 1321 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 IGKV6-21A0A0C4DH24 114 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 VPS37CA5D8V6 355 aaPredicted RBP23.67■■□□□ 1.38
MTCL1-204ENST00000517554 VTNP04004 478 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 RPLP2P05387 115 aaKnown RBP23.67■■□□□ 1.38
MTCL1-204ENST00000517554 DEFB103AP81534 67 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 IER5Q5VY09 327 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 Q7L0L9 218 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 TMCO2Q7Z6W1 182 aaPredicted RBP23.67■■□□□ 1.38
MTCL1-204ENST00000517554 TPH2Q8IWU9 490 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 ZSWIM4Q9H7M6 989 aa23.67■■□□□ 1.38
MTCL1-204ENST00000517554 A0A087WWV3 80 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 ABHD14A-ACY1A0A1B0GW23 586 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 ATP2A2P16615 1042 aaKnown RBP23.66■■□□□ 1.38
MTCL1-204ENST00000517554 RABGGTBP53611 331 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 TBC1D8BQ0IIM8 1120 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 GPR153Q6NV75 609 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.66■■□□□ 1.38
MTCL1-204ENST00000517554 HSCBQ8IWL3 235 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 TMEM40Q8WWA1 233 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 PPP1R16BQ96T49 567 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 IFIH1Q9BYX4 1025 aaKnown RBP23.66■■□□□ 1.38
MTCL1-204ENST00000517554 CYP26B1Q9NR63 512 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 PTPRSQ13332 1948 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 EVPLQ92817 2033 aa23.66■■□□□ 1.38
MTCL1-204ENST00000517554 GPR32O75388 356 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 MED24O75448 989 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 LYPLA2O95372 231 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 PDCP20941 246 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 YWHABP31946 246 aaKnown RBP23.65■■□□□ 1.38
MTCL1-204ENST00000517554 FXR2P51116 673 aaKnown RBP eCLIP23.65■■□□□ 1.38
MTCL1-204ENST00000517554 IKBKEQ14164 716 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 SEPT8Q92599 483 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 SUGCTQ9HAC7 445 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 DKC1O60832 514 aaKnown RBP eCLIP23.65■■□□□ 1.38
MTCL1-204ENST00000517554 MAFO75444 373 aaPredicted RBP23.65■■□□□ 1.38
MTCL1-204ENST00000517554 DNAJB2P25686 324 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 CD52P31358 61 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 KIZQ2M2Z5 673 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 CATSPER3Q86XQ3 398 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 MTMR6Q9Y217 621 aa23.65■■□□□ 1.38
MTCL1-204ENST00000517554 YBX2Q9Y2T7 364 aaKnown RBP23.65■■□□□ 1.38
MTCL1-204ENST00000517554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.64■■□□□ 1.37
MTCL1-204ENST00000517554 MYOGP15173 224 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 TSHZ1Q6ZSZ6 1077 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 IGSF22Q8N9C0 903 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms