RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ARHGEF35A5YM69 484 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 RCCD1A6NED2 376 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF233A6NK53 670 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 AGPSO00116 658 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 GGPS1O95749 300 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 LMNAP02545 664 aaKnown RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 FAM153BP0C7A2 387 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 FGFR2P21802 821 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 PABPC4Q13310 644 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 FAM153CQ494X1 144 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 PRR16Q569H4 304 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 ANKRD20A3Q5VUR7 823 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 GRAMD1AQ96CP6 724 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 UIMC1Q96RL1 719 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 SH3GL3Q99963 347 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 TUBB6Q9BUF5 446 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 MOV10L1Q9BXT6 1211 aaKnown RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 FAM153AQ9UHL3 310 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 USP15Q9Y4E8 981 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 STXBP3O00186 592 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 MAPK13O15264 365 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 DESP17661 470 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 HNRNPH3P31942 346 aaKnown RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 KIAA1755Q5JYT7 1200 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 PPP1R18Q6NYC8 613 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 C1orf131Q8NDD1 294 aaKnown RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 PPP1R14CQ8TAE6 165 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 COA7Q96BR5 231 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 TRIM4Q9C037 500 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 SEMA6BQ9H3T3 888 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 LARSQ9P2J5 1176 aaKnown RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 INTUQ9ULD6 942 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 ARL2BPQ9Y2Y0 163 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 FOXP2O15409 715 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 TRAPPC3O43617 180 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 DCTN3O75935 186 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 CYP19A1P11511 503 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 KRT5P13647 590 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SLC8A3P57103 927 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SGO2Q562F6 1265 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 GPATCH4Q5T3I0 446 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PHLDB2Q86SQ0 1253 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FUKQ8N0W3 1084 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 MED15Q96RN5 788 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 TSC22D3Q99576 134 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PRMT1Q99873 361 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 VPS37BQ9H9H4 285 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 RABGAP1Q9Y3P9 1069 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 NID2Q14112 1375 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SKIP12755 728 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 BTDP43251 543 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 KNOP1Q1ED39 458 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 EDRF1Q3B7T1 1238 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FAM178BQ8IXR5 827 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC47Q8N1G4 583 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 GDAP1Q8TB36 358 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PITPNM3Q9BZ71 974 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FAM129AQ9BZQ8 928 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 ANAPC5Q9UJX4 755 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PIK3C2AO00443 1686 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 DNAJC8O75937 253 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FOSP01100 380 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 CRKLP46109 303 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 ITGB3BPQ13352 177 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 IQCKQ8N0W5 287 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 TBC1D22AQ8WUA7 517 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 USP40Q9NVE5 1235 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 EXOC7Q9UPT5 735 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 MEGF6O75095 1541 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 A0A087X0T9 212 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SLC26A4O43511 780 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 CHMP2AO43633 222 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 DIAPH2O60879 1101 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 NR3C1P04150 777 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FAM228BP0C875 321 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PDHBP11177 359 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 UCHL3P15374 230 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 FXR2P51116 673 aaKnown RBP eCLIP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 CAV1Q03135 178 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 SPATA21Q7Z572 469 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 COL23A1Q86Y22 540 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-203ENST00000517490 METTL13Q8N6R0 699 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 ERP44Q9BS26 406 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 TRIM51Q9BSJ1 452 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 DNAJC12Q9UKB3 198 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 PFASO15067 1338 aa7.19□□□□□ -1.26
CPNE3-203ENST00000517490 ARHGAP23Q9P227 1491 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PPP1R12AO14974 1030 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 CLIC2O15247 247 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ACSL3O95573 720 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ATP6V1G2O95670 118 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 CDK8P49336 464 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms