RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 POLR3EQ9NVU0 708 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 CUEDC1Q9NWM3 386 aaPredicted RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 C2orf42Q9NWW7 574 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 WNT6Q9Y6F9 365 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 DCHS2Q6V1P9 2916 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 EMSYQ7Z589 1322 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 ANO9A1A5B4 782 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 TBC1D12O60347 775 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 OPHN1O60890 802 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 CLASP2O75122 1294 aaKnown RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 PPFIA2O75334 1257 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 TAF5LO75529 589 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 DDAH2O95865 285 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 ANXA1P04083 346 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 MYCLP12524 364 aaPredicted RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 BMP3P12645 472 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 HSP90B1P14625 803 aaKnown RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 HOXA6P31267 233 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 UQCRFS1P47985 274 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 PFKPQ01813 784 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 CHRNDQ07001 517 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 MAPK6Q16659 721 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 DUSP28Q4G0W2 176 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 TRIM61Q5EBN2 209 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 C6orf118Q5T5N4 469 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 ERICH1Q86X53 443 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF710Q8N1W2 664 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 GLIS1Q8NBF1 620 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 XAGE3Q8WTP9 111 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 KAZALD1Q96I82 304 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 TESK2Q96S53 571 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 SEMA3CQ99985 751 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 MTG1Q9BT17 334 aaPredicted RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 NUSAP1Q9BXS6 441 aaKnown RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 USP26Q9BXU7 913 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 TMEM260Q9NX78 707 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 EVLQ9UI08 416 aaPredicted RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 PHTF1Q9UMS5 762 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 MAFBQ9Y5Q3 323 aaPredicted RBP4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 SPAG17Q6Q759 2223 aa4.04□□□□□ -1.76
SCARNA13-201ENST00000516672 ACANP16112 2415 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 ENTPD3O75355 529 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 DGKIO75912 1065 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 FGF18O76093 207 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 FAM87AP0C7U9 286 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 CD1EP15812 388 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 EPCAMP16422 314 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 ACTN2P35609 894 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 IGHMBP2P38935 993 aaKnown RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 CASRP41180 1078 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 ATXN3P54252 364 aaPredicted RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 CHMP4BP1P59074 171 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 JAG1P78504 1218 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 KLRC3Q07444 240 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 TRIM28Q13263 835 aaKnown RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 PAN2Q504Q3 1202 aaKnown RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 GDF6Q6KF10 455 aaPredicted RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 XKR5Q6UX68 686 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 Q71RC1 249 aaPredicted RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 TIPARPQ7Z3E1 657 aaKnown RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 CYP2U1Q7Z449 544 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 GLRX5Q86SX6 157 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 NAXDQ8IW45 347 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF248Q8NDW4 579 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 PRR7Q8TB68 274 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 PIGOQ8TEQ8 1089 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 BCL7CQ8WUZ0 217 aaPredicted RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 SEPT8Q92599 483 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 MIB2Q96AX9 1013 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 C12orf42Q96LP6 360 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 GTPBP2Q9BX10 602 aaKnown RBP4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 KATNBL1Q9H079 304 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 HEBP1Q9NRV9 189 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 MIS18AQ9NYP9 233 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 CHPF2Q9P2E5 772 aa4.03□□□□□ -1.76
SCARNA13-201ENST00000516672 HERC2O95714 4834 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 MYH15Q9Y2K3 1946 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 GOLGA8CPA6NN73 597 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 K7ENP7 123 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 KCNK3O14649 394 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 DCLK1O15075 740 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 BRINP1O60477 761 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 DKK1O94907 266 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 SFTPCP11686 197 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 LAMP2P13473 410 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 VCAM1P19320 739 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 USP5P45974 858 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 CD97P48960 835 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 EIF4G2P78344 907 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 SMAD1Q15797 465 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 INO80CQ6PI98 192 aaPredicted RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 KCNT2Q6UVM3 1135 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 RASGRP2Q7LDG7 609 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 CABP7Q86V35 215 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 CMTR2Q8IYT2 770 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 SPATA5Q8NB90 893 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 PDCD6IPQ8WUM4 868 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 STAMQ92783 540 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 FGF14Q92915 247 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms