RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 EAF1Q96JC9 268 aaPredicted RBP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 DRC1Q96MC2 740 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 NEK1Q96PY6 1258 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 FERD3LQ96RJ6 166 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 MAP3K14Q99558 947 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 KIF2CQ99661 725 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 C22orf23Q9BZE7 217 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 KIAA1683Q9H0B3 1180 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 RNF208Q9H0X6 261 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 KCNF1Q9H3M0 494 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 PIDD1Q9HB75 910 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 MKNK2Q9HBH9 465 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 AS3MTQ9HBK9 375 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 BRMS1Q9HCU9 246 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 CABP5Q9NP86 173 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 MTMR4Q9NYA4 1195 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 PRKAG2Q9UGJ0 569 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 SAP30BPQ9UHR5 308 aaKnown RBP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 ANGEL1Q9UNK9 670 aaKnown RBP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 AP4E1Q9UPM8 1137 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 SLC45A1Q9Y2W3 748 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 TMX2Q9Y320 296 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 R3HCC1Q9Y3T6 440 aaKnown RBP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 SNX14Q9Y5W7 946 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 TACC3Q9Y6A5 838 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 TNKSO95271 1327 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 LOC285556D6RIA3 1793 aa2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 BAZ2AQ9UIF9 1905 aaKnown RBP2.56□□□□□ -2
SCARNA16.3-201ENST00000516595 A0A0G2JLL6 359 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 MANSC4A6NHS7 340 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 FAM155AB1AL88 458 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 B4E1Z4 1266 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SMIM22K7EJ46 135 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RNF225M0QZC1 329 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 WDR46O15213 610 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PRC1O43663 620 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF862O60290 1169 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RANBP6O60518 1105 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 GREM1O60565 184 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PRDM1O75626 825 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 WISP1O95388 367 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 GDF11O95390 407 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 DLGAP3O95886 979 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CTSBP07858 339 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CALM1P0DP23 149 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CALM2P0DP24 149 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CALM3P0DP25 149 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PDHBP11177 359 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 TOP1P11387 765 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CETPP11597 493 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 AKR1B1P15121 316 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 HSPA6P17066 643 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PLCG1P19174 1290 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CASTP20810 708 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RPS6KB1P23443 525 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SMARCA1P28370 1054 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 HOXA7P31268 230 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 MAP2K2P36507 400 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 NASPP49321 788 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF165P49910 485 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 GTF2A2P52657 109 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ANTXR2P58335 489 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 C1QTNF8P60827 252 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 TFAP4Q01664 338 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ID3Q02535 119 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RPL6Q02878 288 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SOX4Q06945 474 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF252P-AS1Q0IIN9 211 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SREBF2Q12772 1141 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 TROAPQ12815 778 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PABPC4Q13310 644 aaKnown RBP eCLIP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SNAPC2Q13487 334 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 MPP2Q14168 576 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 INPP5AQ14642 412 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 WTAPQ15007 396 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SEPT2Q15019 361 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ANKRD1Q15327 319 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SF3A1Q15459 793 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PPM1JQ5JR12 505 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 WIPI1Q5MNZ9 446 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 GPATCH4Q5T3I0 446 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 IFIT1BQ5T764 474 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PRAMEF18Q5VWM3 479 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SCARA3Q6AZY7 606 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RGMBQ6NW40 437 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 BTNL9Q6UXG8 535 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 RUFY3Q7L099 469 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 CYB5R4Q7L1T6 521 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 MIGA2Q7L4E1 593 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 FASTKD5Q7L8L6 764 aaKnown RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PRRT2Q7Z6L0 340 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ANKRD23Q86SG2 305 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 PDZD3Q86UT5 571 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 SIAH1Q8IUQ4 282 aa2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 FAM177A1Q8N128 213 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 ENAHQ8N8S7 591 aaPredicted RBP2.55□□□□□ -2
SCARNA16.3-201ENST00000516595 IGDCC4Q8TDY8 1250 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms