RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, human

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-213	ENST00000515859	CCDC65	Q8IXS2	484 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	BBX	Q8WY36	941 aa	Predicted RBP	27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	CEP170P1	Q96L14	293 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	TIPIN	Q9BVW5	301 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	EXOC1	Q9NV70	894 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	PPME1	Q9Y570	386 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	WDR81	Q562E7	1941 aa		27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	MYH9	P35579	1960 aa	Known RBP	27.62	■■■□□ 2.01
TUSC3-213	ENST00000515859	LGALS2	P05162	132 aa		27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	IDE	P14735	1019 aa		27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	CNGA1	P29973	690 aa		27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	GIT2	Q14161	759 aa		27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	TRMT1L	Q7Z2T5	733 aa	Known RBP	27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	CYP26B1	Q9NR63	512 aa		27.61	■■■□□ 2.01
TUSC3-213	ENST00000515859	MLKL	Q8NB16	471 aa		27.6	■■■□□ 2.01
TUSC3-213	ENST00000515859	ATP8B4	Q8TF62	1192 aa		27.6	■■■□□ 2.01
TUSC3-213	ENST00000515859	ZNF215	Q9UL58	517 aa	Predicted RBP	27.6	■■■□□ 2.01
TUSC3-213	ENST00000515859	ODF2L	Q9ULJ1	636 aa		27.6	■■■□□ 2.01
TUSC3-213	ENST00000515859	FRMD3	A2A2Y4	597 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	GRK4	P32298	578 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	NPEPPS	P55786	919 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	PSMD2	Q13200	908 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	PLA2G4F	Q68DD2	849 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	ISM2	Q6H9L7	571 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	TRIM50	Q86XT4	487 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	REEP2	Q9BRK0	252 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	PANK4	Q9NVE7	773 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	TMEM150B	A6NC51	233 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	RARB	P10826	455 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	ANO6	Q4KMQ2	910 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	LENG1	Q96BZ8	264 aa	Predicted RBP	27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	C16orf70	Q9BSU1	422 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	NAT10	Q9H0A0	1025 aa	Known RBP	27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	SPC25	Q9HBM1	224 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	DACH1	Q9UI36	760 aa		27.59	■■■□□ 2.01
TUSC3-213	ENST00000515859	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	TBCA	O75347	108 aa	Known RBP	27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	DGAT1	O75907	488 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	BMP6	P22004	513 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	GJA9	P57773	515 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	DPCR1	Q3MIW9	517 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	COL4A3BP	Q9Y5P4	624 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	PTCH2	Q9Y6C5	1203 aa		27.58	■■■□□ 2.01
TUSC3-213	ENST00000515859	HBP1	O60381	514 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	MARK3	P27448	753 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	NKX3-2	P78367	333 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	EHHADH	Q08426	723 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	RAD51AP2	Q09MP3	1159 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	GSE1	Q14687	1217 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	PLCB4	Q15147	1175 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	FSCN1	Q16658	493 aa	Known RBP	27.57	■■■□□ 2
TUSC3-213	ENST00000515859	GAS2L3	Q86XJ1	694 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859	DNAJC25	Q9H1X3	360 aa		27.57	■■■□□ 2
TUSC3-213	ENST00000515859		H3BRB1	525 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	USO1	O60763	962 aa	Known RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	INHA	P05111	366 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	GAP43	P17677	238 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	CCND3	P30281	292 aa	Predicted RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	COASY	Q13057	564 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	TARBP2	Q15633	366 aa	Known RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	MTERF2	Q49AM1	385 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	CT47A1	Q5JQC4	288 aa	Predicted RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	EXOC8	Q8IYI6	725 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	UPF3A	Q9H1J1	476 aa	Known RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	TUT1	Q9H6E5	874 aa	Known RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	PTPN22	Q9Y2R2	807 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	KPNA6	O60684	536 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.56	■■■□□ 2
TUSC3-213	ENST00000515859	MCPH1	Q8NEM0	835 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	SH2D3A	Q9BRG2	576 aa		27.56	■■■□□ 2
TUSC3-213	ENST00000515859	MSC	O60682	206 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	FAM13A	O94988	1023 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	RFC5	P40937	340 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	ZNF131	P52739	623 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	CACNB1	Q02641	598 aa	Predicted RBP	27.55	■■■□□ 2
TUSC3-213	ENST00000515859	DRC1	Q96MC2	740 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	PARVG	Q9HBI0	331 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	PDLIM7	Q9NR12	457 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	SEL1L	Q9UBV2	794 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	TRPC6	Q9Y210	931 aa		27.55	■■■□□ 2
TUSC3-213	ENST00000515859	ZNF286B	P0CG31	522 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	PPP1R2	P41236	205 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	ZNF165	P49910	485 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	SLC7A3	Q8WY07	619 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	CEP89	Q96ST8	783 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	RNPEP	Q9H4A4	650 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	ZHX3	Q9H4I2	956 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	ATP6V0A4	Q9HBG4	840 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	HMX1	Q9NP08	348 aa	Predicted RBP	27.54	■■■□□ 2
TUSC3-213	ENST00000515859	DDX20	Q9UHI6	824 aa	Known RBP	27.54	■■■□□ 2
TUSC3-213	ENST00000515859	SYNRG	Q9UMZ2	1314 aa		27.54	■■■□□ 2
TUSC3-213	ENST00000515859	ZEB2	O60315	1214 aa		27.53	■■■□□ 2
TUSC3-213	ENST00000515859	HIP1R	O75146	1068 aa		27.53	■■■□□ 2
TUSC3-213	ENST00000515859	C6orf222	P0C671	652 aa	Predicted RBP	27.53	■■■□□ 2
TUSC3-213	ENST00000515859	POLG	P54098	1239 aa	Predicted RBP	27.53	■■■□□ 2
TUSC3-213	ENST00000515859	FAM26F	Q5R3K3	315 aa		27.53	■■■□□ 2
TUSC3-213	ENST00000515859	FAM200A	Q8TCP9	573 aa		27.53	■■■□□ 2
TUSC3-213	ENST00000515859	DHX33	Q9H6R0	707 aa	Known RBP	27.53	■■■□□ 2
TUSC3-213	ENST00000515859	F2	P00734	622 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms