RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TMEM62Q0P6H9 643 aa21.78■■□□□ 1.08
LMNA-225ENST00000515824 ORC2Q13416 577 aaPredicted RBP21.78■■□□□ 1.08
LMNA-225ENST00000515824 TCTN1Q2MV58 587 aa21.78■■□□□ 1.08
LMNA-225ENST00000515824 BANK1Q8NDB2 785 aa21.78■■□□□ 1.08
LMNA-225ENST00000515824 IFIH1Q9BYX4 1025 aaKnown RBP21.78■■□□□ 1.08
LMNA-225ENST00000515824 OSBPL7Q9BZF2 842 aa21.78■■□□□ 1.08
LMNA-225ENST00000515824 NOL7Q9UMY1 257 aaKnown RBP21.78■■□□□ 1.08
LMNA-225ENST00000515824 SQORQ9Y6N5 450 aa21.78■■□□□ 1.08
LMNA-225ENST00000515824 MYH9P35579 1960 aaKnown RBP21.78■■□□□ 1.08
LMNA-225ENST00000515824 DDX11L8A8MPP1 907 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 WNT7AO00755 349 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 C22orf31O95567 290 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 GHRP10912 638 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 U2AF2P26368 475 aaKnown RBP eCLIP21.77■■□□□ 1.08
LMNA-225ENST00000515824 TMOD1P28289 359 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 TXKP42681 527 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 RABGGTBP53611 331 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 FBXO47Q5MNV8 452 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 NCAPH2Q6IBW4 605 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 HERC6Q8IVU3 1022 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 KIAA0319LQ8IZA0 1049 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 USP38Q8NB14 1042 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 MTMR9Q96QG7 549 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 NIFKQ9BYG3 293 aaKnown RBP21.77■■□□□ 1.08
LMNA-225ENST00000515824 CELF4Q9BZC1 486 aaKnown RBP21.77■■□□□ 1.08
LMNA-225ENST00000515824 TTC12Q9H892 705 aaPredicted RBP21.77■■□□□ 1.08
LMNA-225ENST00000515824 SEPT9Q9UHD8 586 aaPredicted RBP21.77■■□□□ 1.08
LMNA-225ENST00000515824 PCDHA11Q9Y5I1 949 aa21.77■■□□□ 1.08
LMNA-225ENST00000515824 H3BQV1 296 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 LPIN1Q14693 890 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 ZNF174Q15697 407 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 EFCAB12Q6NXP0 572 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 TTYH1Q9H313 450 aaPredicted RBP21.76■■□□□ 1.07
LMNA-225ENST00000515824 ZNF576Q9H609 170 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
LMNA-225ENST00000515824 AMHP03971 560 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 DEFB103AP81534 67 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 SPIRE1Q08AE8 756 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 TBC1D8BQ0IIM8 1120 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 MTERF2Q49AM1 385 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 TTC38Q5R3I4 469 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 MCTP1Q6DN14 999 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 TSHZ1Q6ZSZ6 1077 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 MAP7D2Q96T17 732 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 NKX2-4Q9H2Z4 354 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 KDM3AQ9Y4C1 1321 aa21.75■■□□□ 1.07
LMNA-225ENST00000515824 STBD1O95210 358 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 CUL4AQ13619 759 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 TARBP2Q15633 366 aaKnown RBP21.74■■□□□ 1.07
LMNA-225ENST00000515824 LARP1BQ659C4 914 aaKnown RBP21.74■■□□□ 1.07
LMNA-225ENST00000515824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.74■■□□□ 1.07
LMNA-225ENST00000515824 ZNF710Q8N1W2 664 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 TMEM60Q9H2L4 133 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 ZSWIM4Q9H7M6 989 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 SUGCTQ9HAC7 445 aa21.74■■□□□ 1.07
LMNA-225ENST00000515824 YBX2Q9Y2T7 364 aaKnown RBP21.74■■□□□ 1.07
LMNA-225ENST00000515824 TLL1O43897 1013 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 MYOGP15173 224 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 ANO5Q75V66 913 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 OTUD6AQ7L8S5 288 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 C4orf19Q8IY42 314 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 DYDC2Q96IM9 177 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 LXNQ9BS40 222 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 RGL1Q9NZL6 768 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 AKT3Q9Y243 479 aa21.73■■□□□ 1.07
LMNA-225ENST00000515824 GJB5O95377 273 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 VTNP04004 478 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 OR52Z1P0C646 297 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 CD52P31358 61 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 CLCN3P51790 818 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 MKRN4PQ13434 485 aaPredicted RBP21.72■■□□□ 1.07
LMNA-225ENST00000515824 PPP2R2DQ66LE6 453 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 MYOCDQ8IZQ8 938 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 LRRC71Q8N4P6 559 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 NEK9Q8TD19 979 aa21.72■■□□□ 1.07
LMNA-225ENST00000515824 EIF2AK1Q9BQI3 630 aaKnown RBP21.72■■□□□ 1.07
LMNA-225ENST00000515824 JPH2Q9BR39 696 aaPredicted RBP21.72■■□□□ 1.07
LMNA-225ENST00000515824 AGO3Q9H9G7 860 aaKnown RBP21.72■■□□□ 1.07
LMNA-225ENST00000515824 TMEM150BA6NC51 233 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 RBAK-RBAKDNI3L0D1 243 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 SLITRK3O94933 977 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 YWHABP31946 246 aaKnown RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 DNM2P50570 870 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 CRYBB1P53674 252 aaPredicted RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 CYP4A11Q02928 519 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 PAK2Q13177 524 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 CTTNQ14247 550 aaKnown RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 ODR4Q5SWX8 454 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 FAM43BQ6ZT52 329 aaPredicted RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 TMCO2Q7Z6W1 182 aaPredicted RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 TPH2Q8IWU9 490 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 EXOC8Q8IYI6 725 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 LINC01465Q8N7H1 131 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 CEP170P1Q96L14 293 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 GUCD1Q96NT3 240 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 CDX2Q99626 313 aaPredicted RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 RAD9AQ99638 391 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 HSD17B14Q9BPX1 270 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms