RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 MEA1Q16626 185 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 ZC2HC1CQ53FD0 456 aaPredicted RBP17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 ODR4Q5SWX8 454 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 WDR59Q6PJI9 974 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 CDHR1Q96JP9 859 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 IWS1Q96ST2 819 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 FBXO40Q9UH90 709 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 UBE4BO95155 1302 aa17.02■□□□□ 0.31
THUMPD3-210ENST00000515662 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 NR3C1P04150 777 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 PFASO15067 1338 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 EPHB6O15197 1021 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 CNTN2Q02246 1040 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 FRMD5Q7Z6J6 570 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 CCDC155Q8N6L0 562 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 ZNF397Q8NF99 534 aaPredicted RBP17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 OPTNQ96CV9 577 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 PCDHA10Q9Y5I2 948 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 NFASCO94856 1347 aa17.01■□□□□ 0.31
THUMPD3-210ENST00000515662 RPL13P26373 211 aaKnown RBP17■□□□□ 0.31
THUMPD3-210ENST00000515662 MOGSQ13724 837 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 GNPTABQ3T906 1256 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 STXBP4Q6ZWJ1 553 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 SMCR8Q8TEV9 937 aaPredicted RBP17■□□□□ 0.31
THUMPD3-210ENST00000515662 ANKEF1Q9NU02 776 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 TMEM150BA6NC51 233 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 BACH1O14867 736 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 HERVK_113P62684 666 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 KCNMA1Q12791 1236 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 MAEAQ7L5Y9 396 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
THUMPD3-210ENST00000515662 STRA6Q9BX79 667 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 DNAI1Q9UI46 699 aa17■□□□□ 0.31
THUMPD3-210ENST00000515662 SCN4AP35499 1836 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 EIF3JO75822 258 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 CNMDO75829 334 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 AKAP3O75969 853 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 STXBP2Q15833 593 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 NFIL3Q16649 462 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 ACRBPQ8NEB7 543 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 IKZF4Q9H2S9 585 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 JPH1Q9HDC5 661 aaPredicted RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 CLIC2O15247 247 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 SLC16A3O15427 465 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 PPP1R37O75864 691 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 FSTL1Q12841 308 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 CCDC43Q96MW1 224 aaKnown RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 SH2D3AQ9BRG2 576 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 PAGR1Q9BTK6 254 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 EPN1Q9Y6I3 576 aaPredicted RBP16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
THUMPD3-210ENST00000515662 A0A0U1RQJ8 604 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 NDUFA10O95299 355 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 HNRNPH3P31942 346 aaKnown RBP16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 ALDH5A1P51649 535 aaPredicted RBP16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 LDLRAD1Q5T700 205 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 NEK11Q8NG66 645 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 ATRIPQ8WXE1 791 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 SLC9A2Q9UBY0 812 aa16.98■□□□□ 0.31
THUMPD3-210ENST00000515662 FANCGO15287 622 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 MAPTP10636 758 aaKnown RBP16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 ICAM3P32942 547 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 CASP4P49662 377 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 CDK17Q00537 523 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 XKR9Q5GH70 373 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 ANO5Q75V66 913 aa16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 PNMA8AQ86V59 439 aaPredicted RBP16.97■□□□□ 0.31
THUMPD3-210ENST00000515662 LZTFL1Q9NQ48 299 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms