RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 TBCKQ8TEA7 893 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 LINC01599Q8WXQ3 324 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 MSH4O15457 936 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 GAS7O60861 476 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 C22orf31O95567 290 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 SFNP31947 248 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 CTNNB1P35222 781 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 KCNQ1P51787 676 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 ANAPC15P60006 121 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 GPM6BQ13491 265 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 ODR4Q5SWX8 454 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 NPAS4Q8IUM7 802 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 KIAA0319LQ8IZA0 1049 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 BLIDQ8IZY5 108 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 LARP6Q9BRS8 491 aaKnown RBP19.77■□□□□ 0.76
DDX41-217ENST00000515562 GABBR1Q9UBS5 961 aa19.77■□□□□ 0.76
DDX41-217ENST00000515562 C5orf67F2Z3F1 127 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 DGKIO75912 1065 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 RB1P06400 928 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 STAG3L1P0CL83 205 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 JAK3P52333 1124 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 BTG3Q14201 252 aaPredicted RBP19.76■□□□□ 0.75
DDX41-217ENST00000515562 Q4G0T1 1027 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 LRCH2Q5VUJ6 765 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 SLC5A5Q92911 643 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 CLP1Q92989 425 aaKnown RBP19.76■□□□□ 0.75
DDX41-217ENST00000515562 ZNF689Q96CS4 500 aaPredicted RBP19.76■□□□□ 0.75
DDX41-217ENST00000515562 C11orf84Q9BUA3 381 aaPredicted RBP19.76■□□□□ 0.75
DDX41-217ENST00000515562 TEKT3Q9BXF9 490 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 DISC1Q9NRI5 854 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 GINS2Q9Y248 185 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 STK36Q9NRP7 1315 aa19.76■□□□□ 0.75
DDX41-217ENST00000515562 WDR81Q562E7 1941 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 M0R2N6 131 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 MAGEB2O15479 319 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 EDIL3O43854 480 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 MOXD1Q6UVY6 613 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 RDM1Q8NG50 284 aa19.75■□□□□ 0.75
DDX41-217ENST00000515562 SLKQ9H2G2 1235 aaPredicted RBP19.75■□□□□ 0.75
DDX41-217ENST00000515562 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
DDX41-217ENST00000515562 CYP3A7-CYP3A51PA0A087WV96 503 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
DDX41-217ENST00000515562 RPS6KA5O75582 802 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 OATP04181 439 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 LINC00271P0C7V0 271 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 XBP1P17861 261 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 CYP3A7P24462 503 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 BMPR1AP36894 532 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 PRKCEQ02156 737 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 SCRN1Q12765 414 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 NFX1Q12986 1120 aaKnown RBP19.74■□□□□ 0.75
DDX41-217ENST00000515562 NONOQ15233 471 aaKnown RBP eCLIP19.74■□□□□ 0.75
DDX41-217ENST00000515562 ANKRD1Q15327 319 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 NPY5RQ15761 445 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 KRT25Q7Z3Z0 450 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 CMTR2Q8IYT2 770 aaKnown RBP19.74■□□□□ 0.75
DDX41-217ENST00000515562 CRIPAKQ8N1N5 446 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 ZNF710Q8N1W2 664 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 METTL13Q8N6R0 699 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 AIFM3Q96NN9 605 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 UBE2ZQ9H832 354 aaPredicted RBP19.74■□□□□ 0.75
DDX41-217ENST00000515562 ERVK-5Q9HDB9 667 aa19.74■□□□□ 0.75
DDX41-217ENST00000515562 EVPLQ92817 2033 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 GPR182O15218 404 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 CHMP2AO43633 222 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 TDP2O95551 362 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 TMOD1P28289 359 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 CRYBB1P53674 252 aaPredicted RBP19.73■□□□□ 0.75
DDX41-217ENST00000515562 TMEM266Q2M3C6 531 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 TRMT1LQ7Z2T5 733 aaKnown RBP19.73■□□□□ 0.75
DDX41-217ENST00000515562 RTN4RL1Q86UN2 441 aaPredicted RBP19.73■□□□□ 0.75
DDX41-217ENST00000515562 BANK1Q8NDB2 785 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 MAP7D2Q96T17 732 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 PLVAPQ9BX97 442 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 LMAN2LQ9H0V9 348 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 TMX1Q9H3N1 280 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 UNC45AQ9H3U1 944 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 C1orf112Q9NSG2 853 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 NRBP2Q9NSY0 501 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 LRFN2Q9ULH4 789 aa19.73■□□□□ 0.75
DDX41-217ENST00000515562 TCF20Q9UGU0 1960 aaKnown RBP19.73■□□□□ 0.75
DDX41-217ENST00000515562 DENND3A2RUS2 1198 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 ZNF862O60290 1169 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 PFKFB2O60825 505 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 PSMD10O75832 226 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 SARSP49591 514 aaKnown RBP19.72■□□□□ 0.75
DDX41-217ENST00000515562 KIZQ2M2Z5 673 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 TMEM40Q8WWA1 233 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 MBOAT7Q96N66 472 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 OSMRQ99650 979 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 PHF20Q9BVI0 1012 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 NSUN3Q9H649 340 aaKnown RBP19.72■□□□□ 0.75
DDX41-217ENST00000515562 TPCN1Q9ULQ1 816 aa19.72■□□□□ 0.75
DDX41-217ENST00000515562 NOC2LQ9Y3T9 749 aaKnown RBP19.72■□□□□ 0.75
DDX41-217ENST00000515562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.71■□□□□ 0.75
DDX41-217ENST00000515562 VTNP04004 478 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 CLCN3P51790 818 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 MIER3Q7Z3K6 550 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms