RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 SIP14410 1827 aa11.46□□□□□ -0.57
SSBP2-219ENST00000515395 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 POTEMA6NI47 508 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 TMOD1P28289 359 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 EPHB4P54760 987 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 CYP4A11Q02928 519 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 TBC1D8BQ0IIM8 1120 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 CTTNQ14247 550 aaKnown RBP11.45□□□□□ -0.58
SSBP2-219ENST00000515395 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 TMEM240Q5SV17 173 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 ZNF365Q70YC5 407 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 NME8Q8N427 588 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 METTL13Q8N6R0 699 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 ZSWIM4Q9H7M6 989 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
SSBP2-219ENST00000515395 RGL1Q9NZL6 768 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 STK24Q9Y6E0 443 aa11.45□□□□□ -0.58
SSBP2-219ENST00000515395 RANBP2P49792 3224 aaKnown RBP11.45□□□□□ -0.58
SSBP2-219ENST00000515395 ZBBXA8MT70 800 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 C22orf31O95567 290 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 BMP15O95972 392 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 PRPHP41219 470 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 MRPS6P82932 125 aaKnown RBP11.44□□□□□ -0.58
SSBP2-219ENST00000515395 HAUS3Q68CZ6 603 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 EFCAB12Q6NXP0 572 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 DTHD1Q6ZMT9 781 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 C16orf59Q7L2K0 433 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 OTOP2Q7RTS6 562 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 EXOC8Q8IYI6 725 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 ZBTB10Q96DT7 871 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
SSBP2-219ENST00000515395 MAP7D2Q96T17 732 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
SSBP2-219ENST00000515395 ZSCAN16Q9H4T2 348 aaPredicted RBP11.44□□□□□ -0.58
SSBP2-219ENST00000515395 LRWD1Q9UFC0 647 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 MICAL3Q7RTP6 2002 aa11.44□□□□□ -0.58
SSBP2-219ENST00000515395 ZBTB42B2RXF5 422 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 SLITRK3O94933 977 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 YWHABP31946 246 aaKnown RBP11.43□□□□□ -0.58
SSBP2-219ENST00000515395 DNM2P50570 870 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 PDIA5Q14554 519 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 CNKSR3Q6P9H4 555 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 CEP170P1Q96L14 293 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 HSD17B14Q9BPX1 270 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 JPH2Q9BR39 696 aaPredicted RBP11.43□□□□□ -0.58
SSBP2-219ENST00000515395 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 CYP26B1Q9NR63 512 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 AKT3Q9Y243 479 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 PPME1Q9Y570 386 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 CDY2AQ9Y6F7 541 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 GBF1Q92538 1859 aa11.43□□□□□ -0.58
SSBP2-219ENST00000515395 TMEM150BA6NC51 233 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 NBNO60934 754 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 STBD1O95210 358 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 CXCL10P02778 98 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 POLGP54098 1239 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 ATP2C1P98194 919 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 RESTQ13127 1097 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 IKBKEQ14164 716 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 TARBP2Q15633 366 aaKnown RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 XKR9Q5GH70 373 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 ANO5Q75V66 913 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 KIAA0319LQ8IZA0 1049 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 LRRC71Q8N4P6 559 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 SLC7A3Q8WY07 619 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 HERVK_113Q902F9 699 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 SEPT8Q92599 483 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 CELF4Q9BZC1 486 aaKnown RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 WRAP73Q9P2S5 460 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-219ENST00000515395 GINS2Q9Y248 185 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 TRPV2Q9Y5S1 764 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
SSBP2-219ENST00000515395 VWA3AA6NCI4 1184 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 EFCAB14O75071 495 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 BAIAP3O94812 1187 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 LYPLA2O95372 231 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 CHRNA1P02708 482 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 VTNP04004 478 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 GHRP10912 638 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 MUTP22033 750 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 RPA1P27694 616 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 CCT6AP40227 531 aaKnown RBP11.41□□□□□ -0.58
SSBP2-219ENST00000515395 RFC5P40937 340 aa11.41□□□□□ -0.58
SSBP2-219ENST00000515395 KCNJ6P48051 423 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms