RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ATP8B4Q8TF62 1192 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 DYDC1Q8WWB3 177 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 PLEKHG4BQ96PX9 1271 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 EPB41L4BQ9H329 900 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 PRKAG3Q9UGI9 489 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 PARP2Q9UGN5 583 aa13.9□□□□□ -0.18
SMAD1-215ENST00000515385 PLCG1P19174 1290 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
SMAD1-215ENST00000515385 RXRBP28702 533 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ATP5DP30049 168 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 RAD23BP54727 409 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
SMAD1-215ENST00000515385 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 FAM192AQ9GZU8 254 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 DPH5Q9H2P9 285 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ZDHHC18Q9NUE0 388 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 KLHL14Q9P2G3 628 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 TLDC2A0PJX2 215 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SPDYE5A6NIY4 337 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 GNA14O95837 355 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SHBGP04278 402 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 PTENP60484 403 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ZRSR2Q15696 482 aaKnown RBP13.89□□□□□ -0.19
SMAD1-215ENST00000515385 GALNT17Q6IS24 598 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 UNC13DQ70J99 1090 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SPATA5Q8NB90 893 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 ASAP3Q8TDY4 903 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 FBXO41Q8TF61 875 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 INPP5DQ92835 1189 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SYT15Q9BQS2 421 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 TANGO6Q9C0B7 1094 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 LRMDAQ9H2I8 198 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 INTUQ9ULD6 942 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 STXBP5LQ9Y2K9 1186 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
SMAD1-215ENST00000515385 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 FLT1P17948 1338 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 NOL4O94818 638 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 PDE8BO95263 885 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 TPBGLP0DKB5 382 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 SH3BGRP55822 239 aaPredicted RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 IFI35P80217 286 aaPredicted RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 LRRC55Q6ZSA7 311 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 ARHGAP18Q8N392 663 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 VGLL2Q8N8G2 317 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 ATL2Q8NHH9 583 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 TPCN2Q8NHX9 752 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 DNAJC9Q8WXX5 260 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 CCDC97Q96F63 343 aaPredicted RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 LSM14BQ9BX40 385 aaKnown RBP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMAD1-215ENST00000515385 ADAMTS1Q9UHI8 967 aa13.88□□□□□ -0.19
SMAD1-215ENST00000515385 PP2D1A8MPX8 630 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 ZSCAN9O15535 394 aaPredicted RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 PRKAB2O43741 272 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 PSMC4P43686 418 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 PHKA1P46020 1223 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 KLRC3Q07444 240 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 DNAJC14Q6Y2X3 702 aaPredicted RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 FITM2Q8N6M3 262 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 ZNF526Q8TF50 670 aaPredicted RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 RNF25Q96BH1 459 aaPredicted RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 FGD4Q96M96 766 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 LRRC4CQ9HCJ2 640 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 MTRF1LQ9UGC7 380 aaKnown RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 COL4A3BPQ9Y5P4 624 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 RASGRF2O14827 1237 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 CREB3O43889 395 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 PEX11AO75192 247 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 EYA4O95677 639 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 ITGA4P13612 1032 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 IFNAR2P48551 515 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 DR1Q01658 176 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms