RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 USP7Q93009 1102 aa2.33□□□□□ -2.04
AC025539.1-201ENST00000515343 AJUBAQ96IF1 538 aa2.33□□□□□ -2.04
AC025539.1-201ENST00000515343 MYOTQ9UBF9 498 aa2.33□□□□□ -2.04
AC025539.1-201ENST00000515343 PTPN22Q9Y2R2 807 aa2.33□□□□□ -2.04
AC025539.1-201ENST00000515343 TSPOAP1O95153 1857 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 CUX1P39880 1505 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 CCDC85CA6NKD9 419 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FOXP2O15409 715 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FUCA1P04066 466 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 NTRK1P04629 796 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ASGR2P07307 311 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 PTPN1P18031 435 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 MANFP55145 182 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ERVFC1P60507 584 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 PAN2Q504Q3 1202 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 TEPPQ6URK8 271 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 NKD2Q969F2 451 aaPredicted RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 GCM1Q9NP62 436 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 DLL4Q9NR61 685 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FAM86C1Q9NVL1 165 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 GULP1Q9UBP9 304 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ZKSCAN5Q9Y2L8 839 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 MADDQ8WXG6 1647 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 TOP2AP11388 1531 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ARHGEF40Q8TER5 1519 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 UTRNP46939 3433 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 MAFGO15525 162 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 GNAT1P11488 350 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ENPP1P22413 925 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 SSTR4P31391 388 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 KPNA1P52294 538 aaPredicted RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ST5P78524 1137 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 TUSC3Q13454 348 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FSCN1Q16658 493 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FAM102BQ5T8I3 360 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 OSTM1Q86WC4 334 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ZSWIM9Q86XI8 627 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 NUP43Q8NFH3 380 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 LPPQ93052 612 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 KCND1Q9NSA2 647 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 TNKSO95271 1327 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 OR14I1A6ND48 311 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 MEIS1O00470 390 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 KIF3BO15066 747 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 C8BP07358 591 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 GUCY2FP51841 1108 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 NEK4P51957 841 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 PIN1Q13526 163 aaPredicted RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 BTBD8Q5XKL5 378 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 C11orf96Q7Z7L8 435 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 SAPCD2Q86UD0 394 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 PTRH1Q86Y79 214 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 BCL6BQ8N143 479 aaPredicted RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 BORCS6Q96GS4 357 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 FUBP3Q96I24 572 aaKnown RBP eCLIP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 CD320Q9NPF0 282 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 JADE2Q9NQC1 790 aa2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 ANGEL1Q9UNK9 670 aaKnown RBP2.32□□□□□ -2.04
AC025539.1-201ENST00000515343 NHSL1Q5SYE7 1610 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CDK12Q9NYV4 1490 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ZNF891A8MT65 544 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 FKTNO75072 461 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CYP7B1O75881 506 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 AGXTP21549 392 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 FPR2P25090 351 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 MYBPC3Q14896 1274 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ZNF174Q15697 407 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CNNM4Q6P4Q7 775 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 DPP8Q6V1X1 898 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CABP7Q86V35 215 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 C11orf74Q86VG3 221 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 KRTAP19-1Q8IUB9 90 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CNTD1Q8N815 330 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 FAXDC2Q96IV6 333 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 DDX21Q9NR30 783 aaKnown RBP eCLIP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 PALD1Q9ULE6 856 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 COQ6Q9Y2Z9 468 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 GRIN2AQ12879 1464 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ZMYM4Q5VZL5 1548 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 C9orf118A6NHY6 69 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ELL2O00472 640 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 TSPAN6O43657 245 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ALDH1L1O75891 902 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 MTHFD2P13995 350 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 LPOP22079 712 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CD96P40200 585 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ADAM8P78325 824 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 KRT72Q14CN4 511 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 KRTAP19-4Q3LI73 84 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 FAM26FQ5R3K3 315 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 ZC3H14Q6PJT7 736 aaKnown RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CPA6Q8N4T0 437 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 CNTD2Q9H8S5 307 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 GIT1Q9Y2X7 761 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 POLA1P09884 1462 aaPredicted RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 SYNMO15061 1565 aa2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 RIMS1Q86UR5 1692 aaKnown RBP2.31□□□□□ -2.04
AC025539.1-201ENST00000515343 SHTN1A0MZ66 631 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms