RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 PIGSQ96S52 555 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 ADAM2Q99965 735 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 ERVK-5Q9HDB9 667 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 CYP26B1Q9NR63 512 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 RGS18Q9NS28 235 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 MAD2L2Q9UI95 211 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 R4GN57 208 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 SALL3Q9BXA9 1300 aa13.62□□□□□ -0.23
CSF1R-208ENST00000515239 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-208ENST00000515239 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 B4E1Z4 1266 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 C9IYK1 514 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 M0QZ92 97 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 ZNF213O14771 459 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
CSF1R-208ENST00000515239 NEFLP07196 543 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 LAG3P18627 525 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 PDE4AP27815 886 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 NT5C2P49902 561 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 FAM189BP81408 668 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 FAM43BQ6ZT52 329 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-208ENST00000515239 TMC7Q7Z402 723 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 GLG1Q92896 1179 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 PCYT2Q99447 389 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 SPTBN2O15020 2390 aa13.61□□□□□ -0.23
CSF1R-208ENST00000515239 EOMESO95936 686 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 FGFR1P11362 822 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 KCNA2P16389 499 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 KRT76Q01546 638 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 TRAF1Q13077 416 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
CSF1R-208ENST00000515239 TDGQ13569 410 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 RSPO4Q2I0M5 234 aaPredicted RBP13.6□□□□□ -0.23
CSF1R-208ENST00000515239 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
CSF1R-208ENST00000515239 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 SIX5Q8N196 739 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 NME8Q8N427 588 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 RUBCNQ92622 972 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 CDHR5Q9HBB8 845 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 C1orf112Q9NSG2 853 aa13.6□□□□□ -0.23
CSF1R-208ENST00000515239 DBR1Q9UK59 544 aaKnown RBP13.6□□□□□ -0.23
CSF1R-208ENST00000515239 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
CSF1R-208ENST00000515239 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
CSF1R-208ENST00000515239 CYTH3O43739 400 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 PBX3P40426 434 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 KRT17Q04695 432 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 XRRA1Q6P2D8 792 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
CSF1R-208ENST00000515239 TMEM161AQ9NX61 479 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
CSF1R-208ENST00000515239 FRYLO94915 3013 aa13.58□□□□□ -0.23
CSF1R-208ENST00000515239 PNMA6FA0A0J9YX94 578 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 SMIM35A0A1B0GVV1 85 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
CSF1R-208ENST00000515239 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 GPRASP2Q96D09 838 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 ZNF558Q96NG5 402 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 CASD1Q96PB1 797 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 ELAC1Q9H777 363 aaKnown RBP13.58□□□□□ -0.24
CSF1R-208ENST00000515239 KCNK12Q9HB15 430 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 ATP6V0A4Q9HBG4 840 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 FBXL21Q9UKT6 434 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 GPR179Q6PRD1 2367 aa13.58□□□□□ -0.24
CSF1R-208ENST00000515239 ITGB5P18084 799 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 PPM1AP35813 382 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 PLCB4Q15147 1175 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 SEC23AQ15436 765 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
CSF1R-208ENST00000515239 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 SUMF1Q8NBK3 374 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
CSF1R-208ENST00000515239 HINFPQ9BQA5 517 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 WNT16Q9UBV4 365 aa13.57□□□□□ -0.24
CSF1R-208ENST00000515239 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 MEIS2O14770 477 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 NARSO43776 548 aaKnown RBP13.56□□□□□ -0.24
CSF1R-208ENST00000515239 CXCL14O95715 111 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 SP9P0CG40 484 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 EPCAMP16422 314 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
CSF1R-208ENST00000515239 DSC3Q14574 896 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
CSF1R-208ENST00000515239 KIAA0319LQ8IZA0 1049 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms