RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 KBTBD13C9JR72 458 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 MYL1P05976 194 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 MYL3P08590 195 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 LIG1P18858 919 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 RARRES1P49788 294 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 PSMC6P62333 389 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 PTPN11Q06124 597 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 MFSD10Q14728 455 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 KIAA0753Q2KHM9 967 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 NFRKBQ6P4R8 1299 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 RNPEPQ9H4A4 650 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 NRCAMQ92823 1304 aa13.36□□□□□ -0.27
PDLIM5-220ENST00000514830 EVPLQ92817 2033 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 CEP290O15078 2479 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 RRN3P2A6NIE6 340 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 E9PMD0 336 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 NR1I2O75469 434 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 COL6A1P12109 1028 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 ADAM17P78536 824 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 LONRF3Q496Y0 759 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 CXCL17Q6UXB2 119 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 KRBA2Q6ZNG9 492 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 SH3RF1Q7Z6J0 888 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 PDILTQ8N807 584 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 DHX58Q96C10 678 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 TIPINQ9BVW5 301 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 PDLIM7Q9NR12 457 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
PDLIM5-220ENST00000514830 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 A0A1W2PQ45 241 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 A0A1W2PQY0 241 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 ZBTB39O15060 712 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 KINO60870 393 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 DGAT1O75907 488 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 RFC5P40937 340 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 AMPD3Q01432 767 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 SV2BQ7L1I2 683 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 PIGOQ8TEQ8 1089 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 JPH2Q9BR39 696 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 SERTAD1Q9UHV2 236 aa13.34□□□□□ -0.27
PDLIM5-220ENST00000514830 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MAGEB2O15479 319 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 SMIM10L2AP0DMW4 78 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 SMIM10L2BP0DMW5 78 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 GNAT1P11488 350 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 INSRRP14616 1297 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 CYP11B2P19099 503 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MARK3P27448 753 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 FXR1P51114 621 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MCM6Q14566 821 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 XKR9Q5GH70 373 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 C1orf186Q6ZWK4 172 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 PAGE5Q96GU1 130 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 PLIN2Q99541 437 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 MTRQ99707 1265 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 C7orf25Q9BPX7 421 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
PDLIM5-220ENST00000514830 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms