RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ABHD8Q96I13 439 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 IFT122Q9HBG6 1241 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 ITGB1BP2Q9UKP3 347 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 GMEB1Q9Y692 573 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 GAKO14976 1311 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 FLT1P17948 1338 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 TMEM247A6NEH6 219 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 COBLO75128 1261 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 RASSF9O75901 435 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PHEXP78562 749 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 INAQ16352 499 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC38Q502W7 563 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 NAALADL2Q58DX5 795 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 TCERG1LQ5VWI1 586 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 ARL6IP4Q66PJ3 421 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 HDXQ7Z353 690 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 BLZF1Q9H2G9 400 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 RYDENQ9NUL5 291 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 POLLQ9UGP5 575 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 R3HDM2Q9Y2K5 976 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 UFL1O94874 794 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 BAG3O95817 575 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 TSPY3P0CV98 308 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 TSPY8P0CW00 308 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 MAP7Q14244 749 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 CNGA3Q16281 694 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SPATA1Q5VX52 437 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 FCHSD1Q86WN1 690 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 CTAGE1Q96RT6 745 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 NAP1L3Q99457 506 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 TMEM60Q9H2L4 133 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 RABEP2Q9H5N1 569 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 BARHL2Q9NY43 387 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 ADD3Q9UEY8 706 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 MAP2K7O14733 419 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 LIN7AO14910 233 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 VIMP08670 466 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 BCRP11274 1271 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 CALML3P27482 149 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 CLK1P49759 484 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 ADKP55263 362 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 STX17P56962 302 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 BPIFB4P59827 614 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 BIRC3Q13489 604 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SEPT7Q16181 437 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 GPR162Q16538 588 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SPDYE2Q495Y8 402 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 C4orf46Q504U0 113 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 GKAP1Q5VSY0 366 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 SUN5Q8TC36 379 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.12□□□□□ -1.115e-7■■■■■ 62.3
PDLIM5-219ENST00000514743 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 CPVLQ9H3G5 476 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 C2CD2Q9Y426 696 aa8.12□□□□□ -1.11
PDLIM5-219ENST00000514743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 GOLGA6L7A0A1B0GV03 622 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 KLRG2A4D1S0 409 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 A6NJR5 290 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ARHGAP6O43182 974 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 FOXD2O60548 495 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 URI1O94763 535 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SERPINB2P05120 415 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 GOLGA8HP0CJ92 632 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CDC25AP30304 524 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CDK8P49336 464 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PDE6CP51160 858 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 RASA2Q15283 850 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 RNF187Q5TA31 235 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 TOGARAM2Q6ZUX3 1019 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 BCAS4Q8TDM0 211 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 USP6NLQ92738 828 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 EFR3BQ9Y2G0 817 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PHLPP2Q6ZVD8 1323 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PLIN4Q96Q06 1357 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 RASSF10A6NK89 507 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PP2D1A8MPX8 630 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 POLRMTO00411 1230 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 STAM2O75886 525 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 HNRNPCP07910 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ATP2B4P23634 1241 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 LONP1P36776 959 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 POLE2P56282 527 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ETF1P62495 437 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SH2D4BQ5SQS7 431 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 B4GALNT4Q76KP1 1039 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms