RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
CDH6-205ENST00000514738 TMCC3Q9ULS5 477 aa17.53■□□□□ 0.4
CDH6-205ENST00000514738 DOLKQ9UPQ8 538 aa17.53■□□□□ 0.4
CDH6-205ENST00000514738 ANO9A1A5B4 782 aa17.52■□□□□ 0.4
CDH6-205ENST00000514738 ARHGAP33O14559 1287 aa17.52■□□□□ 0.4
CDH6-205ENST00000514738 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
CDH6-205ENST00000514738 GTF2H1P32780 548 aa17.52■□□□□ 0.4
CDH6-205ENST00000514738 ZNF844Q08AG5 666 aa17.52■□□□□ 0.4
CDH6-205ENST00000514738 TTC8Q8TAM2 541 aa17.52■□□□□ 0.4
CDH6-205ENST00000514738 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
CDH6-205ENST00000514738 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.4
CDH6-205ENST00000514738 DCDC2CA8MYV0 355 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 H0YGN5 161 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 H7C1D1 291 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 HSPA9P38646 679 aaKnown RBP17.52■□□□□ 0.39
CDH6-205ENST00000514738 SKIV2L2P42285 1042 aaKnown RBP17.52■□□□□ 0.39
CDH6-205ENST00000514738 PRCPP42785 496 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 CCDC6Q16204 474 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 OR7G1Q8NGA0 311 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.39
CDH6-205ENST00000514738 KLHL4Q9C0H6 718 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.39
CDH6-205ENST00000514738 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 SEPT10Q9P0V9 454 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 NFS1Q9Y697 457 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 TRAPPC8Q9Y2L5 1435 aa17.52■□□□□ 0.39
CDH6-205ENST00000514738 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 ZC3H13Q5T200 1668 aaKnown RBP17.51■□□□□ 0.39
CDH6-205ENST00000514738 AP3B1O00203 1094 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 IDEP14735 1019 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 PTPN2P17706 415 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 ETFBP38117 255 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 WASHC2DQ5SRD0 308 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 BRSK1Q8TDC3 778 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 DGCR14Q96DF8 476 aaKnown RBP17.51■□□□□ 0.39
CDH6-205ENST00000514738 NUP85Q9BW27 656 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 CEP152O94986 1710 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 NPHP3-ACAD11A0A0J9YXS1 232 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 KMOO15229 486 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 STRNO43815 780 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 SNX3O60493 162 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 HOXD13P35453 343 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDH6-205ENST00000514738 HSD17B4P51659 736 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 POU5F1Q01860 360 aaKnown RBP17.51■□□□□ 0.39
CDH6-205ENST00000514738 ZNF423Q2M1K9 1284 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 PSKH2Q96QS6 385 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 NSRP1Q9H0G5 558 aaKnown RBP17.51■□□□□ 0.39
CDH6-205ENST00000514738 WDR17Q8IZU2 1322 aa17.51■□□□□ 0.39
CDH6-205ENST00000514738 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 SH3PXD2BA1X283 911 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 CHKAP35790 457 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 EIF2B2P49770 351 aaKnown RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 C15orf59Q2T9L4 293 aaPredicted RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 ZCCHC8Q6NZY4 707 aaKnown RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 CFAP61Q8NHU2 1237 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 NRG4Q8WWG1 115 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 CRNKL1Q9BZJ0 848 aaKnown RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 EPB41L5Q9HCM4 733 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 EXOC7Q9UPT5 735 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 OR6B1O95007 311 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 VPS41P49754 854 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 CROCCP3Q8IVE0 287 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 LILRB2Q8N423 598 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 RIN3Q8TB24 985 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 PLEKHO2Q8TD55 490 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 GIPC3Q8TF64 312 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 CNGB3Q9NQW8 809 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 DDX43Q9NXZ2 648 aaKnown RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
CDH6-205ENST00000514738 ADCY10Q96PN6 1610 aa17.5■□□□□ 0.39
CDH6-205ENST00000514738 FUOMA2VDF0 154 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 ECE2O60344 883 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 GYPCP04921 128 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDH6-205ENST00000514738 WDR72Q3MJ13 1102 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 MED30Q96HR3 178 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 ZBTB21Q9ULJ3 1066 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 NR2E3Q9Y5X4 410 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 EPN1Q9Y6I3 576 aaPredicted RBP17.49■□□□□ 0.39
CDH6-205ENST00000514738 HIP1O00291 1037 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 ENTPD5O75356 428 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 AFPP02771 609 aaKnown RBP17.49■□□□□ 0.39
CDH6-205ENST00000514738 RPL17P18621 184 aaKnown RBP17.49■□□□□ 0.39
CDH6-205ENST00000514738 HSD17B3P37058 310 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 PPP4CP60510 307 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 PTH1RQ03431 593 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
CDH6-205ENST00000514738 VWA3BQ502W6 1294 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 SATL1Q86VE3 508 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 NUTM2AQ8IVF1 878 aaPredicted RBP17.49■□□□□ 0.39
CDH6-205ENST00000514738 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
CDH6-205ENST00000514738 TCEANC2Q96MN5 208 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms