RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RABGAP1Q9Y3P9 1069 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 DUSP10Q9Y6W6 482 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 EPHB6O15197 1021 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 TLR2O60603 784 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 DEXIO95424 95 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 SLC25A27O95847 323 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 FAM107AO95990 144 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 CYP2D6P10635 497 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 HOXD10P28358 340 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 KIF5BP33176 963 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 LSP1P33241 339 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 PRCPP42785 496 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 METAP2P50579 478 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLIP1-205ENST00000514271 VAV2P52735 878 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 STIM1Q13586 685 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 FBXW10Q5XX13 1052 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 CYP4F22Q6NT55 531 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 SPATA4Q8NEY3 305 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 MYCBPAPQ8TBZ2 947 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 LZTFL1Q9NQ48 299 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
CLIP1-205ENST00000514271 A6NJR5 290 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 KIF5CO60282 957 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 APBA1Q02410 837 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 LRRC55Q6ZSA7 311 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 ASRGL1Q7L266 308 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 ATP8B4Q8TF62 1192 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 IQCDQ96DY2 449 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 LRRC1Q9BTT6 524 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 TFR2Q9UP52 801 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 GRID2IPA4D2P6 1211 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 IFIT3O14879 490 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FAM153BP0C7A2 387 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 SNHG28P0DPA3 235 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 SEPT2Q15019 361 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FAM110CQ1W6H9 321 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FAM153CQ494X1 144 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 CENPPQ6IPU0 288 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 HOMER1Q86YM7 354 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 DIS3L2Q8IYB7 885 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 ZBTB9Q96C00 473 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 CCSER1Q9C0I3 900 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 NDST4Q9H3R1 872 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 MAP3K20Q9NYL2 800 aaKnown RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FBXO40Q9UH90 709 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FAM153AQ9UHL3 310 aa8.15□□□□□ -1.1
CLIP1-205ENST00000514271 FNDC1Q4ZHG4 1894 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-205ENST00000514271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-205ENST00000514271 A6NHS1 94 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 KCNJ18B7U540 433 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 NRDCO43847 1150 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 SRGAP2O75044 1071 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 GLI1P08151 1106 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 GJA5P36382 358 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 PRPHP41219 470 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 EPHB4P54760 987 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 MOGSQ13724 837 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 KCNJ12Q14500 433 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 ANKRD20A8PQ5CZ79 823 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 MEI1Q5TIA1 1274 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 PRAMEF18Q5VWM3 479 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 SREK1Q8WXA9 508 aaKnown RBP8.15□□□□□ -1.11
CLIP1-205ENST00000514271 BRI3BPQ8WY22 251 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 DYNLL2Q96FJ2 89 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 AGPAT5Q9NUQ2 364 aa8.15□□□□□ -1.11
CLIP1-205ENST00000514271 ZMYND10O75800 440 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 EEF2P13639 858 aaKnown RBP8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CASP1P29466 404 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 SPP2Q13103 211 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 COG2Q14746 738 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CCDC13Q8IYE1 715 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 FUKQ8N0W3 1084 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 ABRAQ8N0Z2 381 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 ZNF473Q8WTR7 871 aaKnown RBP8.14□□□□□ -1.11
CLIP1-205ENST00000514271 TMEM174Q8WUU8 243 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 TRERF1Q96PN7 1200 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 SPOCK3Q9BQ16 436 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CAPS2Q9BXY5 557 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 GLT8D2Q9H1C3 349 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 ADAMTS5Q9UNA0 930 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 LIN7AO14910 233 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-205ENST00000514271 FKTNO75072 461 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 ERLIN2O94905 339 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 GDF11O95390 407 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 MAPK4P31152 587 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 TBC1D8BQ0IIM8 1120 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 MCM6Q14566 821 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms