RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 SPTLC2O15270 562 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 EVI5O60447 810 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 YEATS4O95619 227 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 CD4P01730 458 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 CLTBP09497 229 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 CTSHP09668 335 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 HOXC8P31273 242 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 YWHABP31946 246 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 KRT85P78386 507 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 KARSQ15046 597 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 MARCH8Q5T0T0 291 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 ARL6IP4Q66PJ3 421 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 ANO5Q75V66 913 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 ANKRD33Q7Z3H0 272 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 KCNK18Q7Z418 384 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 CABP7Q86V35 215 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 LRRC71Q8N4P6 559 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 ERMNQ8TAM6 284 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 NEK9Q8TD19 979 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 LRRC15Q8TF66 581 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 LEO1Q8WVC0 666 aaPredicted RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 SYMPKQ92797 1274 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 EPSTI1Q96J88 318 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 PNMA5Q96PV4 448 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 PPP1R16BQ96T49 567 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 HSD17B14Q9BPX1 270 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 RAB34Q9BZG1 259 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 ZSWIM4Q9H7M6 989 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 DDX19AQ9NUU7 478 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 CHMP5Q9NZZ3 219 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 TUBE1Q9UJT0 475 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 MROH7Q68CQ1 1323 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
TOPBP1-209ENST00000513818 TRIM43BA6NCK2 446 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 DCDC2CA8MYV0 355 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TLR3O15455 904 aaKnown RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 HBP1O60381 514 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 C22orf31O95567 290 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 ITGB8P26012 769 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 ME1P48163 572 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 RGS19P49795 217 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 SLC26A2P50443 739 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 CLCN3P51790 818 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 ADAM17P78536 824 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 GRB10Q13322 594 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 DRP2Q13474 957 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 KRT79Q5XKE5 535 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 C4orf19Q8IY42 314 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 RASSF8Q8NHQ8 419 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 FAM167AQ96KS9 214 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 CEP170P1Q96L14 293 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TUFT1Q9NNX1 390 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 TBX21Q9UL17 535 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 SRPRBQ9Y5M8 271 aaKnown RBP10.96□□□□□ -0.65
TOPBP1-209ENST00000513818 SCN5AQ14524 2016 aa10.96□□□□□ -0.66
TOPBP1-209ENST00000513818 COL1A2P08123 1366 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 NRCAMQ92823 1304 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 A0A087X0B3 334 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 E9PMD0 336 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 PPP6R2O75170 966 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 KLRC1P26715 233 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 RPA1P27694 616 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CYP2C18P33260 490 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 LONP1P36776 959 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 UBA7P41226 1012 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CCL23P55773 120 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 MLLT1Q03111 559 aaPredicted RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 PDIA5Q14554 519 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 TRIM71Q2Q1W2 868 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 XKR9Q5GH70 373 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 ZNF484Q5JVG2 852 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 SHC4Q6S5L8 630 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 SERINC5Q86VE9 423 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 TNPO1Q92973 898 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CDK5RAP3Q96JB5 506 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 POLR3CQ9BUI4 534 aaPredicted RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 NOC4LQ9BVI4 516 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 WNT8AQ9H1J5 351 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 HIPK3Q9H422 1215 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CYP26B1Q9NR63 512 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 NRBP2Q9NSY0 501 aa10.95□□□□□ -0.66
TOPBP1-209ENST00000513818 CFAP45Q9UL16 551 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms