RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 ELP1O95163 1332 aa6.9□□□□□ -1.3
GYPB-215ENST00000513677 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
GYPB-215ENST00000513677 MYO9BQ13459 2157 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 PRDM1O75626 825 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 PLA2G5P39877 138 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 CDK7P50613 346 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 KCNQ1P51787 676 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 GJA9P57773 515 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 SNAP25P60880 206 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 PSMC6P62333 389 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 TNFAIP2Q03169 654 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 PLA2G4EQ3MJ16 856 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
GYPB-215ENST00000513677 ADAMTSL4Q6UY14 1074 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 DEFB128Q7Z7B8 93 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 TLK2Q86UE8 772 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
GYPB-215ENST00000513677 PPP1R13LQ8WUF5 828 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 KIF1BPQ96EK5 621 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 POP1Q99575 1024 aaKnown RBP6.89□□□□□ -1.31
GYPB-215ENST00000513677 OSMRQ99650 979 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 AP5M1Q9H0R1 490 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 TRPV6Q9H1D0 765 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 ABHD16BQ9H3Z7 469 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 TTC28Q96AY4 2481 aa6.89□□□□□ -1.31
GYPB-215ENST00000513677 DNAJC25-GNG10A0A024R161 153 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 CPNE3O75131 537 aaKnown RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 APPP05067 770 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 ALAS1P13196 640 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 CST5P28325 142 aaPredicted RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 TDO2P48775 406 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
GYPB-215ENST00000513677 ITGA7Q13683 1181 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 GRIK4Q16099 956 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 RASIP1Q5U651 963 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 PEAR1Q5VY43 1037 aaPredicted RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 MAMDC4Q6UXC1 1216 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 FMR1NBQ8N0W7 255 aaPredicted RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 MSL3Q8N5Y2 521 aaKnown RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 FGD4Q96M96 766 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 PUS7LQ9H0K6 701 aaKnown RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 UPF3AQ9H1J1 476 aaKnown RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
GYPB-215ENST00000513677 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 CHD9Q3L8U1 2897 aa6.88□□□□□ -1.31
GYPB-215ENST00000513677 ASTN1O14525 1302 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 TMEM232C9JQI7 657 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 PDE2AO00408 941 aaPredicted RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 SMARCA5O60264 1052 aaPredicted RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 ZEB2O60315 1214 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 B4GALT4O60513 344 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CD4P01730 458 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 MYL3P08590 195 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CYP2C9P11712 490 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 BMP3P12645 472 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 ATP5JP18859 108 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CDC27P30260 824 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CDC25BP30305 580 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 FSCN1Q16658 493 aaKnown RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 FAM47CQ5HY64 1035 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 TMEM63BQ5T3F8 832 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 KRT40Q6A162 431 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 ZSCAN25Q6NSZ9 544 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 FBXO16Q8IX29 292 aaPredicted RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 ZNF444Q8N0Y2 327 aaPredicted RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 CACTIN-AS1Q8N1I8 211 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CHST13Q8NET6 341 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-215ENST00000513677 ARNTL2Q8WYA1 636 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 HAUS7Q99871 368 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 NOC4LQ9BVI4 516 aaKnown RBP6.87□□□□□ -1.31
GYPB-215ENST00000513677 FTOQ9C0B1 505 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-215ENST00000513677 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 ACAD9Q9H845 621 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 SLC38A10Q9HBR0 1119 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 RNF146Q9NTX7 359 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 NYAP2Q9P242 653 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 FEM1BQ9UK73 627 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 LRRC37A2A6NM11 1700 aa6.87□□□□□ -1.31
GYPB-215ENST00000513677 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
GYPB-215ENST00000513677 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
GYPB-215ENST00000513677 GRIN2DO15399 1336 aa6.86□□□□□ -1.31
GYPB-215ENST00000513677 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
GYPB-215ENST00000513677 FAM86C2PA6NEL3 165 aa6.86□□□□□ -1.31
GYPB-215ENST00000513677 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
GYPB-215ENST00000513677 CTAGE5O15320 804 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms