RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	KLRC4	O43908	158 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ATP6V1G1	O75348	118 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TSPY3	P0CV98	308 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TSPY8	P0CW00	308 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	CCNE1	P24864	410 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PLTP	P55058	493 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ADCY1	Q08828	1119 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PRPF4B	Q13523	1007 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	RCN2	Q14257	317 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SLC29A2	Q14542	456 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SLC9C1	Q4G0N8	1177 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	FIGN	Q5HY92	759 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	MAPKAPK5	Q8IW41	473 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TTC8	Q8TAM2	541 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	UTP4	Q969X6	686 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PHF20	Q9BVI0	1012 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ZMYND12	Q9H0C1	365 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	RHBDL2	Q9NX52	303 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SCOC	Q9UIL1	159 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	USP54	Q70EL1	1684 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	BICDL2	A1A5D9	508 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PGRMC1	O00264	195 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	RIMBP2	O15034	1052 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ADAMTS3	O15072	1205 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TPBGL	P0DKB5	382 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	MAGEA10	P43363	369 aa	Predicted RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	LBR	Q14739	615 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PKN1	Q16512	942 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	DBN1	Q16643	649 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SLC44A5	Q8NCS7	719 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PIGO	Q8TEQ8	1089 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	NDN	Q99608	321 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TRIM7	Q9C029	511 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SRP68	Q9UHB9	627 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TMEM59L	Q9UK28	342 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	FOXO6	A8MYZ6	492 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	GM2A	P17900	193 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	CASP7	P55210	303 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TFAP4	Q01664	338 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	TMEM62	Q0P6H9	643 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	RAPGEF1	Q13905	1077 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	NAALADL2	Q58DX5	795 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	PDXDC1	Q6P996	788 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ATL2	Q8NHH9	583 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	STK32A	Q8WU08	396 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	BAP1	Q92560	729 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	KANSL2	Q9H9L4	492 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	KCNK9	Q9NPC2	374 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	SEPT11	Q9NVA2	429 aa	Known RBP	12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	GALNT8	Q9NY28	637 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	BLOC1S6	Q9UL45	172 aa		12.06	□□□□□ -0.48
PDCD6-210	ENST00000513582	ABCC12	Q96J65	1359 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582		A0A087X0T9	212 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	PEX11A	O75192	247 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	ENTPD5	O75356	428 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	FAM228B	P0C875	321 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	TXK	P42681	527 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	CRKL	P46109	303 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	NAPA	P54920	295 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	EIF3B	P55884	814 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	ASTE1	Q2TB18	679 aa	Predicted RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	RASIP1	Q5U651	963 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	HGSNAT	Q68CP4	663 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	ASRGL1	Q7L266	308 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	ZC3H18	Q86VM9	953 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	GBP7	Q8N8V2	638 aa	Predicted RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	SCFD2	Q8WU76	684 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	ANKS1A	Q92625	1134 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	LUC7L	Q9NQ29	371 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.05	□□□□□ -0.48	9e-7	■■■■■ 53.5
PDCD6-210	ENST00000513582	USH1C	Q9Y6N9	552 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	CCDC169	A6NNP5	214 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	GNPAT	O15228	680 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	TARS	P26639	723 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	GSTT1	P30711	240 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	PMS2	P54278	862 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	DYNC1I2	Q13409	638 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	MYBPC3	Q14896	1274 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	DIXDC1	Q155Q3	683 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	VSIG1	Q86XK7	387 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	METTL13	Q8N6R0	699 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	NEK9	Q8TD19	979 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	DDX50	Q9BQ39	737 aa	Known RBP	12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	MYH1	P12882	1939 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	FER1L4	A9Z1Z3	1794 aa		12.05	□□□□□ -0.48
PDCD6-210	ENST00000513582	RHOBTB3	O94955	611 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	USP17L8	P0C7I0	530 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	KCNA3	P22001	575 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	ABCD1	P33897	745 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	MAGEA8	P43361	318 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	POLR2F	P61218	127 aa	Known RBP	12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	SFMBT2	Q5VUG0	894 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	OR52E8	Q6IFG1	317 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	ZNF449	Q6P9G9	518 aa		12.04	□□□□□ -0.48
PDCD6-210	ENST00000513582	RNF25	Q96BH1	459 aa	Predicted RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms