RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
TCOF1-211ENST00000513346 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
TCOF1-211ENST00000513346 RAD17O75943 681 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 ACSL3O95573 720 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 TAF12Q16514 161 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 ZBTB10Q96DT7 871 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 MAK16Q9BXY0 300 aaKnown RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 DAPK3O43293 454 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 TPD52P55327 224 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 OXER1Q8TDS5 423 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 GRAMD1AQ96CP6 724 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 GYG2O15488 501 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 FSBPO95073 299 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 SCTRP47872 440 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 PAPD7Q5XG87 772 aaKnown RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 PAX7P23759 505 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 PPM1FP49593 454 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 RCN2Q14257 317 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 PSMD6Q15008 389 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 MS4A14Q96JA4 679 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 EDEM3Q9BZQ6 932 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 INTUQ9ULD6 942 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-211ENST00000513346 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
TCOF1-211ENST00000513346 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 CHN1P15882 459 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 CA4P22748 312 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
TCOF1-211ENST00000513346 SCARF1Q14162 830 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-211ENST00000513346 GADL1Q6ZQY3 521 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-211ENST00000513346 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 ANP32DO95626 131 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 SRGNP10124 158 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 ERVK-24P63145 666 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 TBC1D10CQ8IV04 446 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 CCDC89Q8N998 374 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 PACSIN2Q9UNF0 486 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-211ENST00000513346 ZBTB17Q13105 803 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 TRIM28Q13263 835 aaKnown RBP12.11□□□□□ -0.47
TCOF1-211ENST00000513346 SPATA21Q7Z572 469 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 DYDC2Q96IM9 177 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
TCOF1-211ENST00000513346 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 TTLL1O95922 423 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 AGTP01019 485 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 MECOMQ03112 1051 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 LMNB2Q03252 620 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 DPYDQ12882 1025 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 SYT2Q8N9I0 419 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 OR2W6PQ8NHA6 318 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 STAMBPL1Q96FJ0 436 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 GPR101Q96P66 508 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 TGS1Q96RS0 853 aaKnown RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 TECPR2O15040 1411 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 PDHBP11177 359 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 BRAFP15056 766 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 LRRC14Q15048 493 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 AGPAT5Q9NUQ2 364 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 NOC2LQ9Y3T9 749 aaKnown RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 GFPT2O94808 682 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 CYP2J2P51589 502 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
TCOF1-211ENST00000513346 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
TCOF1-211ENST00000513346 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms