RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 BHMT2Q9H2M3 363 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 TUT1Q9H6E5 874 aaKnown RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 NRBP2Q9NSY0 501 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 ZNF215Q9UL58 517 aaPredicted RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 HAS3O00219 553 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 MYL3P08590 195 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 MARK3P27448 753 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 MDM2Q00987 491 aaPredicted RBP13.97□□□□□ -0.17
PDPN-210ENST00000513143 KCNA10Q16322 511 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 SV2BQ7L1I2 683 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 PCSK9Q8NBP7 692 aaKnown RBP13.97□□□□□ -0.17
PDPN-210ENST00000513143 PAGE5Q96GU1 130 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 CCDC34Q96HJ3 373 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 TSEN34Q9BSV6 310 aaKnown RBP13.97□□□□□ -0.17
PDPN-210ENST00000513143 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 CLSTN2Q9H4D0 955 aa13.97□□□□□ -0.17
PDPN-210ENST00000513143 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 TMEM150BA6NC51 233 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 HBP1O60381 514 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 MYCP01106 439 aaPredicted RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 ASGR1P07306 291 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 NPEPPSP55786 919 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 AMPD3Q01432 767 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 XKR9Q5GH70 373 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 TRMT1LQ7Z2T5 733 aaKnown RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 MTG1Q9BT17 334 aaPredicted RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 KATNAL1Q9BW62 490 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 TMEM63CQ9P1W3 806 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 SEPT9Q9UHD8 586 aaPredicted RBP13.96□□□□□ -0.17
PDPN-210ENST00000513143 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
PDPN-210ENST00000513143 MOXD2PA6NHM9 499 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 SSBP05455 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDPN-210ENST00000513143 MYL1P05976 194 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 GJB1P08034 283 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CYP11B2P19099 503 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 AFMP43652 599 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 PSEN2P49810 448 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 MFSD10Q14728 455 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 ARSHQ5FYA8 562 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CCDC183Q5T5S1 534 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 RINT1Q6NUQ1 792 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
PDPN-210ENST00000513143 CNNM4Q6P4Q7 775 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CXCL17Q6UXB2 119 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 C1orf186Q6ZWK4 172 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 STAMQ92783 540 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
PDPN-210ENST00000513143 CEP170P1Q96L14 293 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
PDPN-210ENST00000513143 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 PPME1Q9Y570 386 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 MYH11P35749 1972 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 EVPLQ92817 2033 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 COL1A2P08123 1366 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 BRCA2P51587 3418 aa13.95□□□□□ -0.18
PDPN-210ENST00000513143 MYMKA6NI61 221 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
PDPN-210ENST00000513143 CABYRO75952 493 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 ACLYP53396 1101 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 POSTNQ15063 836 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 CAMK4Q16566 473 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 PADI6Q6TGC4 694 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 GPBP1Q86WP2 473 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 CCDC43Q96MW1 224 aaKnown RBP13.94□□□□□ -0.18
PDPN-210ENST00000513143 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 RUSC1Q9BVN2 902 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 TRIM9Q9C026 710 aa13.94□□□□□ -0.18
PDPN-210ENST00000513143 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
PDPN-210ENST00000513143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
PDPN-210ENST00000513143 DNM1LO00429 736 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 SGPL1O95470 568 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 INSRRP14616 1297 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 GUCY2CP25092 1073 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 RFC5P40937 340 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 DPYDQ12882 1025 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 PNOCQ13519 176 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 CUL4BQ13620 913 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 RBM43Q6ZSC3 357 aaKnown RBP13.93□□□□□ -0.18
PDPN-210ENST00000513143 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
PDPN-210ENST00000513143 DDX12PQ92771 950 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 DNAJC19Q96DA6 116 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms