RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 PITPNM1O00562 1244 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 C22orf31O95567 290 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 BRD1O95696 1058 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 SELPP16109 830 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 YWHABP31946 246 aaKnown RBP19.48■□□□□ 0.71
DDR1-270ENST00000513043 GRIN1Q05586 938 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 FPGSQ05932 587 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 PDIA5Q14554 519 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 ARL6IP4Q66PJ3 421 aaKnown RBP19.48■□□□□ 0.71
DDR1-270ENST00000513043 TAF2Q6P1X5 1199 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 TMEM199Q8N511 208 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 METTL13Q8N6R0 699 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 ZNF579Q8NAF0 562 aaKnown RBP19.48■□□□□ 0.71
DDR1-270ENST00000513043 SNX29Q8TEQ0 813 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 ZNF396Q96N95 335 aaPredicted RBP19.48■□□□□ 0.71
DDR1-270ENST00000513043 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
DDR1-270ENST00000513043 PCDHA2Q9Y5H9 948 aa19.48■□□□□ 0.71
DDR1-270ENST00000513043 IQCF3P0C7M6 154 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 ACRP10323 421 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 EPHB4P54760 987 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 TBC1D8BQ0IIM8 1120 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 TMEM62Q0P6H9 643 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
DDR1-270ENST00000513043 LRRC8DQ7L1W4 858 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 DEFB128Q7Z7B8 93 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 LRRC71Q8N4P6 559 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 CEP170P1Q96L14 293 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 GDF15Q99988 308 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 POLR3CQ9BUI4 534 aaPredicted RBP19.47■□□□□ 0.71
DDR1-270ENST00000513043 UBE2OQ9C0C9 1292 aaKnown RBP19.47■□□□□ 0.71
DDR1-270ENST00000513043 TUFT1Q9NNX1 390 aa19.47■□□□□ 0.71
DDR1-270ENST00000513043 BMP2KQ9NSY1 1161 aaPredicted RBP19.47■□□□□ 0.71
DDR1-270ENST00000513043 RPA1P27694 616 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 CLCN3P51790 818 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 RBL2Q08999 1139 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 STK38Q15208 465 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 TARBP2Q15633 366 aaKnown RBP19.46■□□□□ 0.71
DDR1-270ENST00000513043 ECM1Q16610 540 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 XKR9Q5GH70 373 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 KRT79Q5XKE5 535 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 HAUS3Q68CZ6 603 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 PPP1R16BQ96T49 567 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 SUGCTQ9HAC7 445 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 CYP26B1Q9NR63 512 aa19.46■□□□□ 0.71
DDR1-270ENST00000513043 SMIM35A0A1B0GVV1 85 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 LYPLA2O95372 231 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 DNM1Q05193 864 aaKnown RBP19.45■□□□□ 0.7
DDR1-270ENST00000513043 PPIGQ13427 754 aaKnown RBP eCLIP19.45■□□□□ 0.77e-14■■■□□ 16.3
DDR1-270ENST00000513043 EFCAB12Q6NXP0 572 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 TRAF7Q6Q0C0 670 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 RSPH3Q86UC2 560 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 CCDC43Q96MW1 224 aaKnown RBP19.45■□□□□ 0.7
DDR1-270ENST00000513043 CEP89Q96ST8 783 aa19.45■□□□□ 0.7
DDR1-270ENST00000513043 MMTAG2Q9BU76 263 aaKnown RBP19.45■□□□□ 0.7
DDR1-270ENST00000513043 MAGEB2O15479 319 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 NASPP49321 788 aaPredicted RBP19.44■□□□□ 0.7
DDR1-270ENST00000513043 MBTPS1Q14703 1052 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 SLC39A14Q15043 492 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 SPECC1Q5M775 1068 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 CLIC6Q96NY7 704 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 PLIN2Q99541 437 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 OSBPL7Q9BZF2 842 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 IL23AQ9NPF7 189 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 FBXO2Q9UK22 296 aaPredicted RBP19.44■□□□□ 0.7
DDR1-270ENST00000513043 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 MYH15Q9Y2K3 1946 aa19.44■□□□□ 0.7
DDR1-270ENST00000513043 SCN5AQ14524 2016 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 CAND2O75155 1236 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 CHRNA1P02708 482 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 VTNP04004 478 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 POLGP54098 1239 aaPredicted RBP19.43■□□□□ 0.7
DDR1-270ENST00000513043 MRPS6P82932 125 aaKnown RBP19.43■□□□□ 0.7
DDR1-270ENST00000513043 DRP2Q13474 957 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 C16orf59Q7L2K0 433 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 LINC00301Q8NCQ3 95 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 ZNF668Q96K58 619 aaPredicted RBP19.43■□□□□ 0.7
DDR1-270ENST00000513043 CSRNP2Q9H175 543 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 ANKEF1Q9NU02 776 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 DDX19AQ9NUU7 478 aaKnown RBP19.43■□□□□ 0.7
DDR1-270ENST00000513043 AKT3Q9Y243 479 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 GINS2Q9Y248 185 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 STK24Q9Y6E0 443 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 CDY2AQ9Y6F7 541 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 TANC1Q9C0D5 1861 aa19.43■□□□□ 0.7
DDR1-270ENST00000513043 NBNO60934 754 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 NCLP19338 710 aaKnown RBP19.42■□□□□ 0.7
DDR1-270ENST00000513043 DDIT3P35638 169 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 LONP1P36776 959 aaKnown RBP19.42■□□□□ 0.7
DDR1-270ENST00000513043 RARRES1P49788 294 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 GPNMBQ14956 572 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 C9orf50Q5SZB4 431 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 RPAINQ86UA6 219 aa19.42■□□□□ 0.7
DDR1-270ENST00000513043 CABP7Q86V35 215 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms