RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 SEPT8Q92599 483 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 AIFM3Q96NN9 605 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 M0R2N6 131 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 FIBPO43427 364 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 LINC00271P0C7V0 271 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 KRT2P35908 639 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 NRIP1P48552 1158 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 ARHGAP1Q07960 439 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 COASYQ13057 564 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 POTEHQ6S545 545 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 KIAA2013Q8IYS2 634 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 MPHOSPH6Q99547 160 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 KIAA1217Q5T5P2 1943 aa11.87□□□□□ -0.51
PDLIM5-217ENST00000512274 KIAA1671Q9BY89 1806 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 FAM237AA0A1B0GTK4 181 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 SORBS3O60504 671 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 GLP2RO95838 553 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 CTSHP09668 335 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 GOLGA8HP0CJ92 632 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 DNAJB1P25685 340 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 RPS6P62753 249 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 CAMK1Q14012 370 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 GSE1Q14687 1217 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 DGKDQ16760 1214 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 CCDC96Q2M329 555 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 ADALQ6DHV7 355 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 EFHBQ8N7U6 833 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
PDLIM5-217ENST00000512274 MYO10Q9HD67 2058 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 EDNRBP24530 442 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 GNA11P29992 359 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 GUCY1B3Q02153 619 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 TRAF1Q13077 416 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PTPAQ15257 358 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 KREMEN2Q8NCW0 462 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 RANBP17Q9H2T7 1088 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 DDX19AQ9NUU7 478 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PCDHA4Q9UN74 947 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PLAGL2Q9UPG8 496 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PCDHGC5Q9Y5F6 944 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 FAM186AA6NE01 2351 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
PDLIM5-217ENST00000512274 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 FSD2A1L4K1 749 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 HAS3O00219 553 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 PER2O15055 1255 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 DTNBO60941 627 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 BTG3Q14201 252 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 RBM43Q6ZSC3 357 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 DNERQ8NFT8 737 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 SMOC2Q9H3U7 446 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 VPS54Q9P1Q0 977 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 PLXNA4Q9HCM2 1894 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
PDLIM5-217ENST00000512274 B4DLN1 442 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 ZBTB5O15062 677 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 SPTLC2O15270 562 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 ITGB1P05556 798 aa11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 TOB1P50616 345 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 MRPL12P52815 198 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-217ENST00000512274 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms