RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
PCDHA4-202ENST00000512229 FUCA2Q9BTY2 467 aa14.21□□□□□ -0.13
PCDHA4-202ENST00000512229 MTFR1LQ9H019 292 aa14.21□□□□□ -0.13
PCDHA4-202ENST00000512229 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
PCDHA4-202ENST00000512229 KIAA1586Q9HCI6 787 aa14.21□□□□□ -0.13
PCDHA4-202ENST00000512229 IQCA1LA6NCM1 817 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 USP27XA6NNY8 438 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 RNF8O76064 485 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 NMT1P30419 496 aaKnown RBP14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 NR1I3Q14994 352 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 MAPK6Q16659 721 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 CROCCP2Q86T23 111 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 EDEM3Q9BZQ6 932 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 ZNF302Q9NR11 478 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 PARP2Q9UGN5 583 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 HACL1Q9UJ83 578 aa14.21□□□□□ -0.14
PCDHA4-202ENST00000512229 SLC37A4O43826 429 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 HIP1RO75146 1068 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 GUCY2DQ02846 1103 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 MTMR3Q13615 1198 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 SURF1Q15526 300 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 FASTKD5Q7L8L6 764 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 SH2D3AQ9BRG2 576 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 APOL6Q9BWW8 343 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 RAB20Q9NX57 234 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 AK9Q5TCS8 1911 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 NPHP3-ACAD11A0A0J9YXS1 232 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 E7EVH7 732 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 SLC26A4O43511 780 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 XPOTO43592 962 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 PSPC1Q8WXF1 523 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 TRIM11Q96F44 468 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 RIT2Q99578 217 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 SLC9A2Q9UBY0 812 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 CAPN11Q9UMQ6 739 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 THAP12O43422 761 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 OAS2P29728 719 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 NLRP7Q8WX94 980 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 REEP2Q9BRK0 252 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 IDI2Q9BXS1 227 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
PCDHA4-202ENST00000512229 RHBDL3P58872 404 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 KRT71Q3SY84 523 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 KRT12Q99456 494 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 KCNF1Q9H3M0 494 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 MAPK4P31152 587 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 FRMD5Q7Z6J6 570 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 MAGOHBQ96A72 148 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 MXRA8Q9BRK3 442 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 DPH5Q9H2P9 285 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 ELP3Q9H9T3 547 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 NALCNQ8IZF0 1738 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 CHD2O14647 1828 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 TLR3O15455 904 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 ATP5DP30049 168 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 VPS41P49754 854 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 VAMP7P51809 220 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 SESTD1Q86VW0 696 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 BEGAINQ9BUH8 593 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 ODF2LQ9ULJ1 636 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 GAKO14976 1311 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 CCDC151A5D8V7 595 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 PGRMC1O00264 195 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 STAM2O75886 525 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 SCYL2Q6P3W7 929 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 FAM83AQ86UY5 434 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 ATG4CQ96DT6 458 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 NKIRAS1Q9NYS0 192 aa14.19□□□□□ -0.14
PCDHA4-202ENST00000512229 A6NNZ2 444 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 ATP2C2O75185 946 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 COPB2P35606 906 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 RPS6P62753 249 aaKnown RBP14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 MTF1Q14872 753 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 TUBB8Q3ZCM7 444 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 FAM213AQ9BRX8 229 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 FAM169AQ9Y6X4 670 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 PITPNM2Q9BZ72 1349 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 CCZ1BP86790 482 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 CCDC89Q8N998 374 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 PPP1R16BQ96T49 567 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 MTRQ99707 1265 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 RSPH3Q86UC2 560 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 CATSPER3Q86XQ3 398 aa14.18□□□□□ -0.14
PCDHA4-202ENST00000512229 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms