RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 TARBP2Q15633 366 aaKnown RBP18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
PDLIM5-216ENST00000511767 MARCH6O60337 910 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 GJB5O95377 273 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 OATP04181 439 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 GHRP10912 638 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 MCM2P49736 904 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 EPHA7Q15375 998 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 XKR3Q5GH77 459 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 RTN4RL1Q86UN2 441 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 APBB2Q92870 758 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 TOP1MTQ969P6 601 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 MTMR9Q96QG7 549 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 TRPV2Q9Y5S1 764 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 CHD9Q3L8U1 2897 aa18.16■□□□□ 0.5
PDLIM5-216ENST00000511767 EVPLQ92817 2033 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 PSMC5P62195 406 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 PRKCEQ02156 737 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 SLFN12Q8IYM2 578 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 MYLIPQ8WY64 445 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 RAD9AQ99638 391 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 TANC1Q9C0D5 1861 aa18.15■□□□□ 0.5
PDLIM5-216ENST00000511767 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 TLL1O43897 1013 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 SLITRK3O94933 977 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 CA3P07451 260 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 TAP1Q03518 808 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 BANK1Q8NDB2 785 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 ZBED2Q9BTP6 218 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
PDLIM5-216ENST00000511767 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 GPR32O75388 356 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 AMHP03971 560 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 U2AF2P26368 475 aaKnown RBP eCLIP18.13■□□□□ 0.491e-7■■■■□ 21.4
PDLIM5-216ENST00000511767 CD52P31358 61 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 ANO5Q75V66 913 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 PRDM12Q9H4Q4 367 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 RGL1Q9NZL6 768 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 WDR81Q562E7 1941 aa18.13■□□□□ 0.49
PDLIM5-216ENST00000511767 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 LCHNA4D1U4 455 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 M0QZ92 97 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 TXKP42681 527 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 ADGRE1Q14246 886 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 ZNF174Q15697 407 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 CALCRLQ16602 461 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 C4orf19Q8IY42 314 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 MYOCDQ8IZQ8 938 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 SH2D3AQ9BRG2 576 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 TTC12Q9H892 705 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 WRAP73Q9P2S5 460 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 NOC2LQ9Y3T9 749 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 INSL6Q9Y581 213 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 COL6A3P12111 3177 aa18.12■□□□□ 0.49
PDLIM5-216ENST00000511767 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 VTNP04004 478 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 TMOD1P28289 359 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 CLCN3P51790 818 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 NOSTRINQ8IVI9 506 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 LRRC71Q8N4P6 559 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 C4orf32Q8N8J7 132 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
PDLIM5-216ENST00000511767 ZBTB39O15060 712 aa18.1■□□□□ 0.49
PDLIM5-216ENST00000511767 NEMFO60524 1076 aa18.1■□□□□ 0.49
PDLIM5-216ENST00000511767 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDLIM5-216ENST00000511767 UPP2O95045 317 aa18.1■□□□□ 0.49
PDLIM5-216ENST00000511767 MCM7P33993 719 aa18.1■□□□□ 0.49
PDLIM5-216ENST00000511767 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms