RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PNOCQ13519 176 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 CUL1Q13616 776 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TAF1BQ53T94 588 aaPredicted RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 ZNF667Q5HYK9 610 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SLFN12LQ6IEE8 588 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TEX2Q8IWB9 1127 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TAGAPQ8N103 731 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 BEST2Q8NFU1 509 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 CCHCR1Q8TD31 782 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 FAM167AQ96KS9 214 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 MAGEB5Q9BZ81 275 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 NGRNQ9NPE2 291 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 AFF4Q9UHB7 1163 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 G3BP2Q9UN86 482 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 RFX7Q2KHR2 1363 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 MYOM1P52179 1685 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SETD1BQ9UPS6 1966 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 ADGRB2O60241 1585 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 KRT87PA6NCN2 255 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 COBLO75128 1261 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 MYO1DO94832 1006 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 PHKA2P46019 1235 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 STXBP2Q15833 593 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 MAP4K1Q92918 833 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 ZNF274Q96GC6 653 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 GDAP1L1Q96MZ0 367 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 EGFL8Q99944 293 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 TRIM62Q9BVG3 475 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 IMPACTQ9P2X3 320 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 COL3A1P02461 1466 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 SPATA31A3Q5VYP0 1347 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 NBPF26B4DH59 902 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 RASGRF2O14827 1237 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 IKBKBO14920 756 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 MMP10P09238 476 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 HLA-DPA1P20036 260 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 IL9RQ01113 521 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 KRBA2Q6ZNG9 492 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 ZC3H15Q8WU90 426 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 WRNIP1Q96S55 665 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 DDX50Q9BQ39 737 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 STX18Q9P2W9 335 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 ZHX2Q9Y6X8 837 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 HEG1Q9ULI3 1381 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 LRRN2O75325 713 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 GCFC2P16383 781 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 ESRRGP62508 458 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 FAM173BQ6P4H8 233 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 SEPT12Q8IYM1 358 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 CFAP36Q96G28 342 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 LSG1Q9H089 658 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 C6orf203Q9P0P8 240 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 DAAM1Q9Y4D1 1078 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 IFT172Q9UG01 1749 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 MAP2P11137 1827 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 LRRD1A4D1F6 860 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 GPBP1L1Q9HC44 474 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 CASS4Q9NQ75 786 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 NDFIP2Q9NV92 336 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 KLHL8Q9P2G9 620 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 ZSCAN9O15535 394 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 GTPBP6O43824 516 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 MT-ND3P03897 115 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 SERPIND1P05546 499 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 LONP1P36776 959 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 SH3BGRP55822 239 aaPredicted RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 WHAMMP3Q1A5X7 153 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 TCP11X2Q5H9J9 407 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP38-203ENST00000511739 LARP4BQ92615 738 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 DCUN1D1Q96GG9 259 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 MASTLQ96GX5 879 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 TRPC7Q9HCX4 862 aa6.2□□□□□ -1.42
USP38-203ENST00000511739 LSM7Q9UK45 103 aaKnown RBP6.2□□□□□ -1.42
USP38-203ENST00000511739 CLIC2O15247 247 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 E2F6O75461 281 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
USP38-203ENST00000511739 AFPP02771 609 aaKnown RBP6.19□□□□□ -1.42
USP38-203ENST00000511739 RALAP11233 206 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 TRIM68Q6AZZ1 485 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 ADCK2Q7Z695 626 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 ERICH1Q86X53 443 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 BTN2A2Q8WVV5 523 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP38-203ENST00000511739 SPZ1Q9BXG8 430 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 SP110Q9HB58 689 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 CFAP69A5D8W1 941 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 TCP1P17987 556 aaKnown RBP6.19□□□□□ -1.42
USP38-203ENST00000511739 DDIT3P35638 169 aa6.19□□□□□ -1.42
USP38-203ENST00000511739 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms