RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ZC3H3Q8IXZ2 948 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 EXOC8Q8IYI6 725 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 SRRTQ9BXP5 876 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ST6GALNAC4Q9H4F1 302 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 MRPL44Q9H9J2 332 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 MLXIPQ9HAP2 919 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ZNF302Q9NR11 478 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 PCDHB13Q9Y5F0 798 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 TRIM49BA6NDI0 452 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 GGPS1O95749 300 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 XKR9Q5GH70 373 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 C17orf99Q6UX52 265 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 FAM178BQ8IXR5 827 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 MYCT1Q8N699 235 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 CCDC150Q8NCX0 1101 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 KIFAP3Q92845 792 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 KCTD10Q9H3F6 313 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ABT1Q9ULW3 272 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ZKSCAN5Q9Y2L8 839 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ITIH6Q6UXX5 1313 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 EMSYQ7Z589 1322 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 BACH1O14867 736 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 ZBTB39O15060 712 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 CALUO43852 315 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 ZNF862O60290 1169 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 COBLO75128 1261 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 HIP1RO75146 1068 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 HOXC6P09630 235 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 PLS3P13797 630 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 SNRPFP62306 86 aaKnown RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 PRKCEQ02156 737 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 MAPK7Q13164 816 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 KRT31Q15323 416 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 SPECC1LQ69YQ0 1117 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 ANO5Q75V66 913 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 SOCS4Q8WXH5 440 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 KCNN1Q92952 543 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
SCLT1-209ENST00000511426 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 TYW1Q9NV66 732 aaKnown RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
SCLT1-209ENST00000511426 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 NRDCO43847 1150 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 LGR5O75473 907 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 STBD1O95210 358 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 GCNT3O95395 438 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 OATP04181 439 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 RPL13P26373 211 aaKnown RBP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 TMEM174Q8WUU8 243 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 MAML3Q96JK9 1138 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 NIFKQ9BYG3 293 aaKnown RBP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 ABHD16BQ9H3Z7 469 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 AZI2Q9H6S1 392 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 NRBP2Q9NSY0 501 aa16.79■□□□□ 0.28
SCLT1-209ENST00000511426 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-209ENST00000511426 A0A1W2PQC6 194 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 RSPH10B2B2RC85 870 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 H0YCG3 227 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 NOP56O00567 594 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 N4BP3O15049 544 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 RSPH10BP0C881 870 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 LAMC2Q13753 1193 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 MORN1Q5T089 497 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 PLPPR4Q7Z2D5 763 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 CCDC186Q7Z3E2 898 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 TMEM206Q9H813 350 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 GSTTP1A0A1W2PQM5 241 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 LGALS16A8MUM7 142 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 ESPNB1AK53 854 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 GAS2O43903 313 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 RFC5P40937 340 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 DNM2P50570 870 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms