RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NCAPHQ15003 741 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 BVESQ8NE79 360 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 TINF2Q9BSI4 451 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 R3HDMLQ9H3Y0 253 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 HCFC2Q9Y5Z7 792 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 ADAMTS20P59510 1910 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 MON2Q7Z3U7 1717 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 TACR1P25103 407 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 ETFBP38117 255 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 ZC3H14Q6PJT7 736 aaKnown RBP7.55□□□□□ -1.2
GYPB-212ENST00000511198 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
GYPB-212ENST00000511198 NME9Q86XW9 330 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 CPNE8Q86YQ8 564 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 COPS5Q92905 334 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 DACT3Q96B18 629 aaPredicted RBP7.55□□□□□ -1.2
GYPB-212ENST00000511198 TMOD3Q9NYL9 352 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 FBLN5Q9UBX5 448 aa7.55□□□□□ -1.2
GYPB-212ENST00000511198 COL4A5P29400 1685 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 ZNF831Q5JPB2 1677 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 BDP1A6H8Y1 2624 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 RFXAPO00287 272 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 KCNH1O95259 989 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 SSBP05455 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
GYPB-212ENST00000511198 FGRP09769 529 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 GLI4P10075 376 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 CRKLP46109 303 aaKnown RBP7.54□□□□□ -1.2
GYPB-212ENST00000511198 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.54□□□□□ -1.2
GYPB-212ENST00000511198 RAPGEF4Q8WZA2 1011 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 DPF3Q92784 378 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 ARMC5Q96C12 935 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 MRGPRX3Q96LB0 322 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 LGR4Q9BXB1 951 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 ACTR10Q9NZ32 417 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
GYPB-212ENST00000511198 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 PAMP19021 973 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 FBLN1P23142 703 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 IGFBP6P24592 240 aaPredicted RBP7.53□□□□□ -1.2
GYPB-212ENST00000511198 ZNF200P98182 395 aaPredicted RBP7.53□□□□□ -1.2
GYPB-212ENST00000511198 CYP4F3Q08477 520 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
GYPB-212ENST00000511198 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 TTLL10Q6ZVT0 673 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 FAM129CQ86XR2 697 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 TRIM59Q8IWR1 403 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 FAM178BQ8IXR5 827 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 BRIP1Q9BX63 1249 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 PRKAG3Q9UGI9 489 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
GYPB-212ENST00000511198 NPHP3-ACAD11A0A0J9YXS1 232 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 ZC3H12DA2A288 527 aaKnown RBP7.52□□□□□ -1.21
GYPB-212ENST00000511198 B2RBV5 119 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 BUB1BO60566 1050 aaPredicted RBP7.52□□□□□ -1.21
GYPB-212ENST00000511198 NAT2P11245 290 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 HOXC9P31274 260 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 IARSP41252 1262 aaKnown RBP7.52□□□□□ -1.21
GYPB-212ENST00000511198 SCRN1Q12765 414 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 TCERG1LQ5VWI1 586 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 GTF2IRD2BQ6EKJ0 949 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 POMZP3Q6PJE2 187 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 GTF2IRD2Q86UP8 949 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
GYPB-212ENST00000511198 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.52□□□□□ -1.21
GYPB-212ENST00000511198 GPRC5CQ9NQ84 441 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 ADARB2Q9NS39 739 aaKnown RBP7.52□□□□□ -1.21
GYPB-212ENST00000511198 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 CLEC1BQ9P126 229 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 STAP2Q9UGK3 403 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 RWDD3Q9Y3V2 267 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 TRIM17Q9Y577 477 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 RPTORQ8N122 1335 aa7.52□□□□□ -1.21
GYPB-212ENST00000511198 KTN1Q86UP2 1357 aaKnown RBP7.51□□□□□ -1.21
GYPB-212ENST00000511198 TRBV23OR9-2A0A075B6M9 112 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 C7orf72A4D263 438 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 KRTAP9-7A8MTY7 169 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 F8W031 263 aaPredicted RBP7.51□□□□□ -1.21
GYPB-212ENST00000511198 PRR5P85299 388 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 CCDC93Q567U6 631 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 LARP1BQ659C4 914 aaKnown RBP7.51□□□□□ -1.21
GYPB-212ENST00000511198 MBLAC2Q68D91 279 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 STYK1Q6J9G0 422 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 MCF2L2Q86YR7 1114 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 RASAL3Q86YV0 1011 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 GUCD1Q96NT3 240 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 MMP19Q99542 508 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 NKX2-4Q9H2Z4 354 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 GBA2Q9HCG7 927 aaPredicted RBP7.51□□□□□ -1.21
GYPB-212ENST00000511198 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 GPRC5DQ9NZD1 345 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 GULP1Q9UBP9 304 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
GYPB-212ENST00000511198 NOP56O00567 594 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms