RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 COBLO75128 1261 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TBCAO75347 108 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CXCL14O95715 111 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF865P0CJ78 1059 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PYGBP11216 843 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 NCLP19338 710 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 NFKBIAP25963 317 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 HMGN5P82970 282 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 BEX3Q00994 111 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PRKCQQ04759 706 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DGKKQ5KSL6 1271 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PLPPR4Q7Z2D5 763 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 HDDC3Q8N4P3 179 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 EFHBQ8N7U6 833 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CACTINQ8WUQ7 758 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PIK3R5Q8WYR1 880 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DYNLL2Q96FJ2 89 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ZSCAN31Q96LW9 406 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF512Q96ME7 567 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM47Q9BQJ4 181 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF577Q9BSK1 485 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CELF4Q9BZC1 486 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 C8orf33Q9H7E9 229 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SUGCTQ9HAC7 445 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ANKFY1Q9P2R3 1169 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 UXTQ9UBK9 157 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SUSD2Q9UGT4 822 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 FZD1Q9UP38 647 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ANKRD31Q8N7Z5 1873 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 KDM3BQ7LBC6 1761 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CACNA1SQ13698 1873 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 H3BNC9 293 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PRRG1O14668 218 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PRDM1O75626 825 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TECP42680 631 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ID4P47928 161 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 MCM2P49736 904 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 KPNA1P52294 538 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 AMPD3Q01432 767 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SUZ12Q15022 739 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 GRIK4Q16099 956 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 NOTUMQ6P988 496 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DGLUCYQ7Z3D6 616 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 BMP8AQ7Z5Y6 402 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CCDC84Q86UT8 332 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DCP1BQ8IZD4 617 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 EMID1Q96A84 441 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CDCA7LQ96GN5 454 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 FAM20AQ96MK3 541 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DCBLD2Q96PD2 775 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 RIT2Q99578 217 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SPZ1Q9BXG8 430 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 IMPG2Q9BZV3 1241 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SLC24A3Q9HC58 644 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 HAUS2Q9NVX0 235 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PARP2Q9UGN5 583 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 NOC2LQ9Y3T9 749 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ADGRA3Q8IWK6 1321 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SLC26A4O43511 780 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TPM2P07951 284 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 HOXB3P14651 431 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ANXA13P27216 316 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 EPHB3P54753 998 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 AK2P54819 239 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PURAQ00577 322 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TSPY1Q01534 308 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SF3A1Q15459 793 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 QRICH1Q2TAL8 776 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DCAF4L1Q3SXM0 396 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PCNX4Q63HM2 1172 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CWC27Q6UX04 472 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 FSIP1Q8NA03 581 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 FLCNQ8NFG4 579 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ATP8B4Q8TF62 1192 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SMG7Q92540 1137 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 MRPS27Q92552 414 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RUBCNQ92622 972 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 IRF7Q92985 503 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PDCD2LQ9BRP1 358 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 COL25A1Q9BXS0 654 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PBX4Q9BYU1 374 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 NACA2Q9H009 215 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DSEQ9UL01 958 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TPX2Q9ULW0 747 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 POLIQ9UNA4 740 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RBM19Q9Y4C8 960 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 NFASCO94856 1347 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RBM47A0AV96 593 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GOLGA6L4A6NEF3 574 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 MAGEC1O60732 1142 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 LGALS2P05162 132 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ICAM3P32942 547 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CCR3P51677 355 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GABPAQ06546 454 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 FAAP100Q0VG06 881 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GRB10Q13322 594 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 USP41Q3LFD5 358 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms