RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	TGS1	Q96RS0	853 aa	Known RBP	13.73	□□□□□ -0.21
CLDND1-223	ENST00000511081	CELF4	Q9BZC1	486 aa	Known RBP	13.73	□□□□□ -0.21
CLDND1-223	ENST00000511081	DISC1	Q9NRI5	854 aa		13.73	□□□□□ -0.21
CLDND1-223	ENST00000511081	KCNJ14	Q9UNX9	436 aa		13.73	□□□□□ -0.21
CLDND1-223	ENST00000511081	LOXHD1	Q8IVV2	1947 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	IGSF9B	Q9UPX0	1349 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	ZNF862	O60290	1169 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	TDP2	O95551	362 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	C22orf31	O95567	290 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	SFN	P31947	248 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	NEK4	P51957	841 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	GRB10	Q13322	594 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	NONO	Q15233	471 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	PPP4R3A	Q6IN85	833 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	ETNPPL	Q8TBG4	499 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	ARNTL2	Q8WYA1	636 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	GTF3C6	Q969F1	213 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	CERS4	Q9HA82	394 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	SUGCT	Q9HAC7	445 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	GJB4	Q9NTQ9	266 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	ORC3	Q9UBD5	711 aa	Predicted RBP	13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	GABBR1	Q9UBS5	961 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	TRPV2	Q9Y5S1	764 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	COL4A6	Q14031	1691 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	BDP1	A6H8Y1	2624 aa		13.72	□□□□□ -0.21
CLDND1-223	ENST00000511081	GAS7	O60861	476 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	STBD1	O95210	358 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	LARGE1	O95461	756 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	XBP1	P17861	261 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	INF2	Q27J81	1249 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	LRCH2	Q5VUJ6	765 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	FAM117B	Q6P1L5	589 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	LINC01465	Q8N7H1	131 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	NECAB1	Q8N987	351 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	NSUN7	Q8NE18	718 aa	Known RBP	13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	WASF1	Q92558	559 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	FAM167A	Q96KS9	214 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	SAMD11	Q96NU1	681 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	FTHL17	Q9BXU8	183 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	UNC45A	Q9H3U1	944 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	RC3H2	Q9HBD1	1191 aa	Known RBP	13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	KCNMB3	Q9NPA1	279 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	NRBP2	Q9NSY0	501 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	PADI3	Q9ULW8	664 aa		13.71	□□□□□ -0.21
CLDND1-223	ENST00000511081	NCOR1	O75376	2440 aa		13.71	□□□□□ -0.22
CLDND1-223	ENST00000511081	MAGEB2	O15479	319 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	CD52	P31358	61 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	JAK3	P52333	1124 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	TARBP2	Q15633	366 aa	Known RBP	13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	ZNF710	Q8N1W2	664 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	OXER1	Q8TDS5	423 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	LINC01599	Q8WXQ3	324 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	TNFRSF25	Q93038	417 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	GJA10	Q969M2	543 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	ZNF689	Q96CS4	500 aa	Predicted RBP	13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	FAM20A	Q96MK3	541 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	CEP89	Q96ST8	783 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	KIF2C	Q99661	725 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	TEKT3	Q9BXF9	490 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	NIFK	Q9BYG3	293 aa	Known RBP	13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	CDHR5	Q9HBB8	845 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	PRDM6	Q9NQX0	595 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	TCEAL9	Q9UHQ7	104 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081	CEP131	Q9UPN4	1083 aa		13.7	□□□□□ -0.22
CLDND1-223	ENST00000511081		M0QZ92	97 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	TBX3	O15119	743 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	GTPBP6	O43824	516 aa	Predicted RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	DTNB	O60941	627 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	GPR32	O75388	356 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	UPP2	O95045	317 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	LINC00271	P0C7V0	271 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	GCFC2	P16383	781 aa	Known RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	CRYBB1	P53674	252 aa	Predicted RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	TMEM62	Q0P6H9	643 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	CCDC85B	Q15834	202 aa	Predicted RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	UGCG	Q16739	394 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	C8orf34	Q49A92	452 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	EARS2	Q5JPH6	523 aa	Known RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	NEK8	Q86SG6	692 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	CKAP2L	Q8IYA6	745 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	PPM1E	Q8WY54	764 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	TMX1	Q9H3N1	280 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	DDX25	Q9UHL0	483 aa	Known RBP	13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	SAMM50	Q9Y512	469 aa		13.69	□□□□□ -0.22
CLDND1-223	ENST00000511081	CCDC194	A0A1B0GVG4	234 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	GALR2	O43603	387 aa	Predicted RBP	13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	SLC37A4	O43826	429 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	DGKI	O75912	1065 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	OAT	P04181	439 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	ST3GAL1	Q11201	340 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	PPP2R5C	Q13362	524 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	LETM2	Q2VYF4	491 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	KRT40	Q6A162	431 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	MIER3	Q7Z3K6	550 aa		13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	CLP1	Q92989	425 aa	Known RBP	13.68	□□□□□ -0.22
CLDND1-223	ENST00000511081	YME1L1	Q96TA2	773 aa		13.68	□□□□□ -0.22

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