RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FAM102BQ5T8I3 360 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 FAM160B1Q5W0V3 765 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 THNSL1Q8IYQ7 743 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 PRSS33Q8NF86 280 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 ATP8B4Q8TF62 1192 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 NEK1Q96PY6 1258 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 TLR9Q9NR96 1032 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 ST3GAL5Q9UNP4 418 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 NOC2LQ9Y3T9 749 aaKnown RBP11.87□□□□□ -0.51
DDX41-211ENST00000510171 MYH6P13533 1939 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 C9IYK1 514 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 SLC27A2O14975 620 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 CCNE2O96020 404 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 ATF7P17544 494 aaPredicted RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 ADCY7P51828 1080 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 CRYBB1P53674 252 aaPredicted RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 NAPAP54920 295 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 ERVFC1P60507 584 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 DUSP6Q16828 381 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 ZNF484Q5JVG2 852 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 ABHD15Q6UXT9 468 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 MICU3Q86XE3 530 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 FBXL6Q8N531 539 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 SUSD6Q92537 303 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 TYW1Q9NV66 732 aaKnown RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 TMEM260Q9NX78 707 aa11.86□□□□□ -0.51
DDX41-211ENST00000510171 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
DDX41-211ENST00000510171 BAZ2BQ9UIF8 2168 aaKnown RBP11.85□□□□□ -0.51
DDX41-211ENST00000510171 SMCO2A6NFE2 343 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
DDX41-211ENST00000510171 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 LAG3P18627 525 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 FAM189BP81408 668 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 CREB3L3Q68CJ9 461 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 SWSAP1Q6NVH7 229 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 MIS18BP1Q6P0N0 1132 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 TMEM184AQ6ZMB5 413 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 COLGALT1Q8NBJ5 622 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 VN1R2Q8NFZ6 395 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
DDX41-211ENST00000510171 GLT8D2Q9H1C3 349 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
DDX41-211ENST00000510171 TMEM161AQ9NX61 479 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 LZTS1Q9Y250 596 aa11.85□□□□□ -0.51
DDX41-211ENST00000510171 COL1A2P08123 1366 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 FSCN2O14926 492 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 FGFR1P11362 822 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 SREBF1P36956 1147 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 TECP42680 631 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 AP3B2Q13367 1082 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 KIZQ2M2Z5 673 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 OSMRQ99650 979 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 S1PR5Q9H228 398 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 CWH43Q9H720 699 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 ELAC1Q9H777 363 aaKnown RBP11.84□□□□□ -0.51
DDX41-211ENST00000510171 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 TTC3P53804 2025 aa11.84□□□□□ -0.51
DDX41-211ENST00000510171 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 DHX15O43143 795 aaKnown RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 GPR32O75388 356 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 HOXB8P17481 243 aaPredicted RBP11.83□□□□□ -0.52
DDX41-211ENST00000510171 ATP4AP20648 1035 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 KRT17Q04695 432 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 TCF15Q12870 199 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 KCNC3Q14003 757 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 RTN1Q16799 776 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 PLPP4Q5VZY2 271 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 ANKRD54Q6NXT1 300 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
DDX41-211ENST00000510171 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms