RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NPEPPSP55786 919 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 MRPS6P82932 125 aaKnown RBP15.27■□□□□ 0.04
SNF8-206ENST00000509989 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.04
SNF8-206ENST00000509989 SAFBQ15424 915 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNF8-206ENST00000509989 TARBP2Q15633 366 aaKnown RBP15.27■□□□□ 0.04
SNF8-206ENST00000509989 CALCRLQ16602 461 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 ZNF484Q5JVG2 852 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 ANO5Q75V66 913 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 RPAINQ86UA6 219 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 LINC01465Q8N7H1 131 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 TMEM40Q8WWA1 233 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 MTMR10Q9NXD2 777 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 COL1A2P08123 1366 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 SMIM35A0A1B0GVV1 85 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.26■□□□□ 0.03
SNF8-206ENST00000509989 LCHNA4D1U4 455 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 TBX3O15119 743 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 NEMFO60524 1076 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 PFKMP08237 780 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 TMEM266Q2M3C6 531 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 MTERF2Q49AM1 385 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 FBXO47Q5MNV8 452 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 TTC38Q5R3I4 469 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 FAM117BQ6P1L5 589 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 TAF2Q6P1X5 1199 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 SEMA6BQ9H3T3 888 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
SNF8-206ENST00000509989 SEPT9Q9UHD8 586 aaPredicted RBP15.26■□□□□ 0.03
SNF8-206ENST00000509989 SMC3Q9UQE7 1217 aa15.26■□□□□ 0.03
SNF8-206ENST00000509989 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 ATP2A2P16615 1042 aaKnown RBP15.25■□□□□ 0.03
SNF8-206ENST00000509989 CD52P31358 61 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 MCM2P49736 904 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 EPHA7Q15375 998 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 IL17AQ16552 155 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 MCTP1Q6DN14 999 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 RTN4RL1Q86UN2 441 aaPredicted RBP15.25■□□□□ 0.03
SNF8-206ENST00000509989 METTL13Q8N6R0 699 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
SNF8-206ENST00000509989 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 TRPV2Q9Y5S1 764 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
SNF8-206ENST00000509989 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 TTC3P53804 2025 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 MYH15Q9Y2K3 1946 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 MARCH6O60337 910 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 CAND2O75155 1236 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 SLITRK3O94933 977 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 ACTN1P12814 892 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 PSMC5P62195 406 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 KIZQ2M2Z5 673 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 TIFAQ96CG3 184 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
SNF8-206ENST00000509989 EIF2AK1Q9BQI3 630 aaKnown RBP15.24■□□□□ 0.03
SNF8-206ENST00000509989 LXNQ9BS40 222 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 NIFKQ9BYG3 293 aaKnown RBP15.24■□□□□ 0.03
SNF8-206ENST00000509989 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
SNF8-206ENST00000509989 TMX1Q9H3N1 280 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 SUGCTQ9HAC7 445 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 NRBP2Q9NSY0 501 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 PCDHA12Q9UN75 941 aa15.24■□□□□ 0.03
SNF8-206ENST00000509989 NOC2LQ9Y3T9 749 aaKnown RBP15.24■□□□□ 0.03
SNF8-206ENST00000509989 COL4A4P53420 1690 aaPredicted RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 MGEA5O60502 916 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 GPR32O75388 356 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 CSDE1O75534 798 aaKnown RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 TECP42680 631 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 QARSP47897 775 aaKnown RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 GNL2Q13823 731 aaKnown RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 XKR3Q5GH77 459 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 FERMT3Q86UX7 667 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 FAM167AQ96KS9 214 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 OSMRQ99650 979 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
SNF8-206ENST00000509989 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
SNF8-206ENST00000509989 ABHD14A-ACY1A0A1B0GW23 586 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 RFXAPO00287 272 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 MED24O75448 989 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 BAIAP3O94812 1187 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 BAG4O95429 457 aaKnown RBP15.22■□□□□ 0.03
SNF8-206ENST00000509989 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
SNF8-206ENST00000509989 P4HBP07237 508 aaKnown RBP15.22■□□□□ 0.03
SNF8-206ENST00000509989 CA3P07451 260 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 SPATA31C1P0DKV0 1188 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 FGFR4P22455 802 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 IKBKEQ14164 716 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms