RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 LINS1Q8NG48 757 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 JPH3Q8WXH2 748 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 C1orf159Q96HA4 380 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 MRGPRX3Q96LB0 322 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 SAMD15Q9P1V8 674 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 FANCIQ9NVI1 1328 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 GOLGB1Q14789 3259 aaKnown RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 ZNF236Q9UL36 1845 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 H2AFYO75367 372 aaKnown RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 CIAO1O76071 339 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 SLITRK5O94991 958 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 NID1P14543 1247 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 DCTN1Q14203 1278 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 PCBP2Q15366 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
NEK1-204ENST00000509912 LONRF2Q1L5Z9 754 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 CDCA2Q69YH5 1023 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 CIAPIN1Q6FI81 312 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 LETMD1Q6P1Q0 360 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 TRIM59Q8IWR1 403 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 MORC4Q8TE76 937 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 PARD3BQ8TEW8 1205 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 TGFBRAP1Q8WUH2 860 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 FBLIM1Q8WUP2 373 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 MAGEB10Q96LZ2 347 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 EPN3Q9H201 632 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 MBIPQ9NS73 344 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 ADAM30Q9UKF2 790 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 DDX60LQ5H9U9 1706 aaKnown RBP6.04□□□□□ -1.44
NEK1-204ENST00000509912 PRR33A8MZF0 331 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 KRT37O76014 449 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 FGFR1P11362 822 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 PAX3P23760 479 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 IL31Q6EBC2 164 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 KLHL23Q8NBE8 558 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 ABHD8Q96I13 439 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 KREMEN1Q96MU8 473 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 WHRNQ9P202 907 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 SPEF2Q9C093 1822 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 CD3EP07766 207 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 NFICP08651 508 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 EXOSC6Q5RKV6 272 aaKnown RBP6.04□□□□□ -1.44
NEK1-204ENST00000509912 APOBEC3FQ8IUX4 373 aaKnown RBP6.04□□□□□ -1.44
NEK1-204ENST00000509912 C7orf61Q8IZ16 206 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 VPS37AQ8NEZ2 397 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 CAPNS2Q96L46 248 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 CDH19Q9H159 772 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 CWC25Q9NXE8 425 aaPredicted RBP6.04□□□□□ -1.44
NEK1-204ENST00000509912 FBXL7Q9UJT9 491 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 EDARQ9UNE0 448 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 LOC285556D6RIA3 1793 aa6.04□□□□□ -1.44
NEK1-204ENST00000509912 PPIP5K2O43314 1243 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 LDHAP00338 332 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 THBDP07204 575 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 PREPP48147 710 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 NOGQ13253 232 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 MTX1Q13505 466 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 MLC1Q15049 377 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 ERICH6BQ5W0A0 696 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 SLC6A19Q695T7 634 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 TTLL7Q6ZT98 887 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 SLC2A13Q96QE2 648 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 TMPRSS13Q9BYE2 586 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 RRP7AQ9Y3A4 280 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 RFPL3O75679 317 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 ZBTB48P10074 688 aaPredicted RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 GPTP24298 496 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 NEK3P51956 506 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 FSTL4Q6MZW2 842 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 CDPF1Q6NVV7 123 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 SLCO4C1Q6ZQN7 724 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 GSTCDQ8NEC7 633 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 ZNF669Q96BR6 464 aaPredicted RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 DSCC1Q9BVC3 393 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 PHF20Q9BVI0 1012 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
NEK1-204ENST00000509912 ARNT2Q9HBZ2 717 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 GPR108Q9NPR9 543 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 C14orf119Q9NWQ9 140 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 CAPNS1P04632 268 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 MYL3P08590 195 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 EPS15P42566 896 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 SCAND1P57086 179 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 RPS8P62241 208 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 WDR43Q15061 677 aaKnown RBP eCLIP6.03□□□□□ -1.44
NEK1-204ENST00000509912 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 PTPRN2Q92932 1015 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 MRPL4Q9BYD3 311 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.03□□□□□ -1.44
NEK1-204ENST00000509912 GBP3Q9H0R5 595 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 SENP2Q9HC62 589 aa6.03□□□□□ -1.44
NEK1-204ENST00000509912 DDX20Q9UHI6 824 aaKnown RBP6.03□□□□□ -1.44
NEK1-204ENST00000509912 INTUQ9ULD6 942 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms